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Cluster: CGMR099484_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2373 k141_2373_22 38702 41923 + 1.B.14.6.1
TC k141_2373 k141_2373_23 41935 43629 + 8.A.46.1.3
CAZyme k141_2373 k141_2373_24 43775 46081 + GH115
CAZyme k141_2373 k141_2373_25 46342 47664 + GH43_24
CAZyme k141_2373 k141_2373_26 47771 49417 + CBM91 | GH43_12
pfam k141_2373 k141_2373_27 49680 50426 + Fic
pfam k141_2373 k141_2373_28 50544 51239 - Lipase_GDSL_lke
CAZyme k141_2373 k141_2373_29 51450 54209 + GH28
CAZyme k141_2373 k141_2373_30 54331 57219 + GH2
CAZyme k141_2373 k141_2373_31 57261 58565 + GH28
Gene ID: k141_2373_22
Type: TC
Location: 38702 - 41923 (+)
Gene ID: k141_2373_23
Type: TC
Location: 41935 - 43629 (+)
Gene ID: k141_2373_24
Type: CAZyme
Location: 43775 - 46081 (+)
Gene ID: k141_2373_25
Type: CAZyme
Location: 46342 - 47664 (+)
Gene ID: k141_2373_26
Type: CAZyme
Location: 47771 - 49417 (+)
Gene ID: k141_2373_27
Type: pfam
Location: 49680 - 50426 (+)
Gene ID: k141_2373_28
Type: pfam
Location: 50544 - 51239 (-)
Gene ID: k141_2373_29
Type: CAZyme
Location: 51450 - 54209 (+)
Gene ID: k141_2373_30
Type: CAZyme
Location: 54331 - 57219 (+)
Gene ID: k141_2373_31
Type: CAZyme
Location: 57261 - 58565 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2373_23 vegan > omnivore 2.40086 0.04214
k141_2373_24 vegan > omnivore 1.58777 0.04214

🧭 Explore Read Mapping of CGC

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