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Cluster: CGMR099484_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_116681 k141_116681_35 41058 44240 + 1.B.14.6.1
pfam k141_116681 k141_116681_36 44278 45732 + SusD_RagB | SusD-like_3
CAZyme k141_116681 k141_116681_37 46254 49481 - GH2
CAZyme k141_116681 k141_116681_38 49540 51609 - GH63
pfam k141_116681 k141_116681_39 51640 53172 - SusD_RagB | SusD-like_3
TC k141_116681 k141_116681_40 53193 56696 - 1.B.14.6.2
STP k141_116681 k141_116681_41 56754 57740 - FecR
STP k141_116681 k141_116681_42 57869 58450 - Sigma70_r2 | Sigma70_r4_2
TC k141_116681 k141_116681_43 58490 60124 - 3.A.1.121.4
TC k141_116681 k141_116681_44 60237 61907 - 2.A.81.1.2
Gene ID: k141_116681_35
Type: TC
Location: 41058 - 44240 (+)
Gene ID: k141_116681_36
Type: pfam
Location: 44278 - 45732 (+)
Gene ID: k141_116681_37
Type: CAZyme
Location: 46254 - 49481 (-)
Gene ID: k141_116681_38
Type: CAZyme
Location: 49540 - 51609 (-)
Gene ID: k141_116681_39
Type: pfam
Location: 51640 - 53172 (-)
Gene ID: k141_116681_40
Type: TC
Location: 53193 - 56696 (-)
Gene ID: k141_116681_41
Type: STP
Location: 56754 - 57740 (-)
Gene ID: k141_116681_42
Type: STP
Location: 57869 - 58450 (-)
Gene ID: k141_116681_43
Type: TC
Location: 58490 - 60124 (-)
Gene ID: k141_116681_44
Type: TC
Location: 60237 - 61907 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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