Cluster: CGMR099484_CGC48
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 13
- Substrate:
- Genome ID: CGMR099484
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_50148 | k141_50148_103 | 120483 | 121451 | + | GT2 |
| CAZyme | k141_50148 | k141_50148_104 | 121463 | 122578 | + | GT4 |
| CAZyme | k141_50148 | k141_50148_105 | 122593 | 123579 | + | GT2 |
| CAZyme | k141_50148 | k141_50148_106 | 123576 | 124478 | + | GT2 |
| pfam | k141_50148 | k141_50148_107 | 124478 | 125506 | + | Acyl_transf_3 |
| NULL(UNKNOWN) | k141_50148 | k141_50148_108 | 125640 | 127076 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_50148 | k141_50148_109 | 127099 | 128325 | + | GT4 |
| CAZyme | k141_50148 | k141_50148_110 | 128339 | 129031 | + | GT32 |
| CAZyme | k141_50148 | k141_50148_111 | 128995 | 130167 | + | GT4 |
| CAZyme | k141_50148 | k141_50148_112 | 130122 | 131060 | + | GT2 |
| CAZyme | k141_50148 | k141_50148_113 | 131057 | 132091 | + | GT2 |
| CAZyme | k141_50148 | k141_50148_114 | 132088 | 133239 | + | GT4 |
| CAZyme | k141_50148 | k141_50148_115 | 133236 | 134246 | + | GT2 |
| pfam | k141_50148 | k141_50148_116 | 134271 | 135380 | + | EpsG |
| CAZyme | k141_50148 | k141_50148_117 | 135505 | 136647 | + | GT4 |
| pfam | k141_50148 | k141_50148_118 | 136659 | 137264 | + | Hexapep | PglD_N |
| TC | k141_50148 | k141_50148_119 | 137261 | 137881 | + | 9.B.18.1.2 |
| pfam | k141_50148 | k141_50148_120 | 138179 | 139531 | - | Endonuclease_NS |
| pfam | k141_50148 | k141_50148_121 | 139619 | 141100 | - | BACON | BACON |
| TC | k141_50148 | k141_50148_122 | 141128 | 144397 | - | 1.B.14.6.4 |
| CAZyme | k141_50148 | k141_50148_123 | 144780 | 146303 | - | GH51_1 |
Gene ID: k141_50148_103
Type: CAZyme
Location: 120483 - 121451 (+)
Type: CAZyme
Location: 120483 - 121451 (+)
Gene ID: k141_50148_104
Type: CAZyme
Location: 121463 - 122578 (+)
Type: CAZyme
Location: 121463 - 122578 (+)
Gene ID: k141_50148_105
Type: CAZyme
Location: 122593 - 123579 (+)
Type: CAZyme
Location: 122593 - 123579 (+)
Gene ID: k141_50148_106
Type: CAZyme
Location: 123576 - 124478 (+)
Type: CAZyme
Location: 123576 - 124478 (+)
Gene ID: k141_50148_107
Type: pfam
Location: 124478 - 125506 (+)
Type: pfam
Location: 124478 - 125506 (+)
Gene ID: k141_50148_108
Type:
Location: 125640 - 127076 (+)
Type:
Location: 125640 - 127076 (+)
Gene ID: k141_50148_109
Type: CAZyme
Location: 127099 - 128325 (+)
Type: CAZyme
Location: 127099 - 128325 (+)
Gene ID: k141_50148_110
Type: CAZyme
Location: 128339 - 129031 (+)
Type: CAZyme
Location: 128339 - 129031 (+)
Gene ID: k141_50148_111
Type: CAZyme
Location: 128995 - 130167 (+)
Type: CAZyme
Location: 128995 - 130167 (+)
Gene ID: k141_50148_112
Type: CAZyme
Location: 130122 - 131060 (+)
Type: CAZyme
Location: 130122 - 131060 (+)
Gene ID: k141_50148_113
Type: CAZyme
Location: 131057 - 132091 (+)
Type: CAZyme
Location: 131057 - 132091 (+)
Gene ID: k141_50148_114
Type: CAZyme
Location: 132088 - 133239 (+)
Type: CAZyme
Location: 132088 - 133239 (+)
Gene ID: k141_50148_115
Type: CAZyme
Location: 133236 - 134246 (+)
Type: CAZyme
Location: 133236 - 134246 (+)
Gene ID: k141_50148_116
Type: pfam
Location: 134271 - 135380 (+)
Type: pfam
Location: 134271 - 135380 (+)
Gene ID: k141_50148_117
Type: CAZyme
Location: 135505 - 136647 (+)
Type: CAZyme
Location: 135505 - 136647 (+)
Gene ID: k141_50148_118
Type: pfam
Location: 136659 - 137264 (+)
Type: pfam
Location: 136659 - 137264 (+)
Gene ID: k141_50148_119
Type: TC
Location: 137261 - 137881 (+)
Type: TC
Location: 137261 - 137881 (+)
Gene ID: k141_50148_120
Type: pfam
Location: 138179 - 139531 (-)
Type: pfam
Location: 138179 - 139531 (-)
Gene ID: k141_50148_121
Type: pfam
Location: 139619 - 141100 (-)
Type: pfam
Location: 139619 - 141100 (-)
Gene ID: k141_50148_122
Type: TC
Location: 141128 - 144397 (-)
Type: TC
Location: 141128 - 144397 (-)
Gene ID: k141_50148_123
Type: CAZyme
Location: 144780 - 146303 (-)
Type: CAZyme
Location: 144780 - 146303 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_50148_109 | vegan > omnivore | 1.00790 | 0.04214 |
| k141_50148_120 | vegan > omnivore | 2.11932 | 0.04214 |
| k141_50148_121 | vegan > omnivore | 1.53517 | 0.04214 |
| k141_50148_122 | vegan > omnivore | 1.71495 | 0.04214 |