Cluster: PUL0723_CGMR099484_C0
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 11
- Substrate: pectin
- Genome ID: CGMR099484
- CGC Family ID: CGCFAM_01809
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_4 | 884 | 3646 | - | GH106 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_5 | 3659 | 5086 | - | GH28 |
| NULL(UNKNOWN) | PUL0723_CGMR099484_C0 | k141_56815_6 | 5102 | 5905 | - | NULL(UNKNOWN) |
| pfam | PUL0723_CGMR099484_C0 | k141_56815_7 | 5902 | 6600 | - | DUF4450 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_8 | 6578 | 8062 | - | GH28 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_9 | 8080 | 9354 | - | CE12 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_10 | 9373 | 12240 | - | GH2 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_12 | 13413 | 15491 | + | GH42 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_13 | 15610 | 16740 | - | GH105 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_14 | 16861 | 20172 | - | GH106 | GH28 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_15 | 20286 | 22139 | - | PL11 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_16 | 22155 | 23438 | - | CE15 |
| CAZyme | PUL0723_CGMR099484_C0 | k141_56815_17 | 23481 | 25262 | - | GH78 |
| NULL(UNKNOWN) | PUL0723_CGMR099484_C0 | k141_56815_18 | 25479 | 25793 | - | NULL(UNKNOWN) |
| pfam | PUL0723_CGMR099484_C0 | k141_56815_19 | 25883 | 28021 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0723_CGMR099484_C0 | k141_56815_20 | 28053 | 31205 | - | 1.B.14.6.1 |
Gene ID: k141_56815_4
Type: CAZyme
Location: 884 - 3646 (-)
Type: CAZyme
Location: 884 - 3646 (-)
Gene ID: k141_56815_5
Type: CAZyme
Location: 3659 - 5086 (-)
Type: CAZyme
Location: 3659 - 5086 (-)
Gene ID: k141_56815_6
Type: null
Location: 5102 - 5905 (-)
Type: null
Location: 5102 - 5905 (-)
Gene ID: k141_56815_7
Type: pfam
Location: 5902 - 6600 (-)
Type: pfam
Location: 5902 - 6600 (-)
Gene ID: k141_56815_8
Type: CAZyme
Location: 6578 - 8062 (-)
Type: CAZyme
Location: 6578 - 8062 (-)
Gene ID: k141_56815_9
Type: CAZyme
Location: 8080 - 9354 (-)
Type: CAZyme
Location: 8080 - 9354 (-)
Gene ID: k141_56815_10
Type: CAZyme
Location: 9373 - 12240 (-)
Type: CAZyme
Location: 9373 - 12240 (-)
Gene ID: k141_56815_12
Type: CAZyme
Location: 13413 - 15491 (+)
Type: CAZyme
Location: 13413 - 15491 (+)
Gene ID: k141_56815_13
Type: CAZyme
Location: 15610 - 16740 (-)
Type: CAZyme
Location: 15610 - 16740 (-)
Gene ID: k141_56815_14
Type: CAZyme
Location: 16861 - 20172 (-)
Type: CAZyme
Location: 16861 - 20172 (-)
Gene ID: k141_56815_15
Type: CAZyme
Location: 20286 - 22139 (-)
Type: CAZyme
Location: 20286 - 22139 (-)
Gene ID: k141_56815_16
Type: CAZyme
Location: 22155 - 23438 (-)
Type: CAZyme
Location: 22155 - 23438 (-)
Gene ID: k141_56815_17
Type: CAZyme
Location: 23481 - 25262 (-)
Type: CAZyme
Location: 23481 - 25262 (-)
Gene ID: k141_56815_18
Type: null
Location: 25479 - 25793 (-)
Type: null
Location: 25479 - 25793 (-)
Gene ID: k141_56815_19
Type: pfam
Location: 25883 - 28021 (-)
Type: pfam
Location: 25883 - 28021 (-)
Gene ID: k141_56815_20
Type: TC
Location: 28053 - 31205 (-)
Type: TC
Location: 28053 - 31205 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Composition
Loading chart...
← Back to Cluster List