Cluster: CGMR099484_CGC61
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR099484
- CGC Family ID: CGCFAM_00089
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_23115 | k141_23115_1 | 1 | 2754 | - | 1.B.14.6.1 |
| pfam | k141_23115 | k141_23115_2 | 2784 | 3668 | - | AP_endonuc_2 |
| TF | k141_23115 | k141_23115_3 | 3833 | 8227 | - | HTH_AraC |
| CAZyme | k141_23115 | k141_23115_4 | 8463 | 11087 | - | GH2 |
| pfam | k141_23115 | k141_23115_5 | 11246 | 13375 | + | S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region |
| STP | k141_23115 | k141_23115_6 | 13403 | 14194 | + | NUDIX |
| TC | k141_23115 | k141_23115_7 | 14278 | 15939 | + | 2.A.81.1.2 |
Gene ID: k141_23115_1
Type: TC
Location: 1 - 2754 (-)
Type: TC
Location: 1 - 2754 (-)
Gene ID: k141_23115_2
Type: pfam
Location: 2784 - 3668 (-)
Type: pfam
Location: 2784 - 3668 (-)
Gene ID: k141_23115_3
Type: TF
Location: 3833 - 8227 (-)
Type: TF
Location: 3833 - 8227 (-)
Gene ID: k141_23115_4
Type: CAZyme
Location: 8463 - 11087 (-)
Type: CAZyme
Location: 8463 - 11087 (-)
Gene ID: k141_23115_5
Type: pfam
Location: 11246 - 13375 (+)
Type: pfam
Location: 11246 - 13375 (+)
Gene ID: k141_23115_6
Type: STP
Location: 13403 - 14194 (+)
Type: STP
Location: 13403 - 14194 (+)
Gene ID: k141_23115_7
Type: TC
Location: 14278 - 15939 (+)
Type: TC
Location: 14278 - 15939 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.