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Cluster: CGMR099484_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_111319 k141_111319_23 30029 33235 - 1.B.14.6.1
TF k141_111319 k141_111319_24 33506 37444 - HTH_AraC
STP k141_111319 k141_111319_25 37709 38773 + PfkB
TC k141_111319 k141_111319_26 39047 42025 - 2.A.6.4.3
peptidase k141_111319 k141_111319_27 42204 44291 - M03.UPA
pfam k141_111319 k141_111319_28 44318 45397 - Exo_endo_phos
TC k141_111319 k141_111319_29 45401 46294 - 9.B.104.1.2
peptidase k141_111319 k141_111319_30 46275 46952 - S54.UPW
pfam k141_111319 k141_111319_31 47163 47435 + Bac_DNA_binding | HU-HIG
CAZyme k141_111319 k141_111319_32 47532 50861 + GH2
Gene ID: k141_111319_23
Type: TC
Location: 30029 - 33235 (-)
Gene ID: k141_111319_24
Type: TF
Location: 33506 - 37444 (-)
Gene ID: k141_111319_25
Type: STP
Location: 37709 - 38773 (+)
Gene ID: k141_111319_26
Type: TC
Location: 39047 - 42025 (-)
Gene ID: k141_111319_27
Type: peptidase
Location: 42204 - 44291 (-)
Gene ID: k141_111319_28
Type: pfam
Location: 44318 - 45397 (-)
Gene ID: k141_111319_29
Type: TC
Location: 45401 - 46294 (-)
Gene ID: k141_111319_30
Type: peptidase
Location: 46275 - 46952 (-)
Gene ID: k141_111319_31
Type: pfam
Location: 47163 - 47435 (+)
Gene ID: k141_111319_32
Type: CAZyme
Location: 47532 - 50861 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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