Cluster: CGMR099484_CGC37
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR099484
- CGC Family ID: CGCFAM_00320
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_116681 | k141_116681_84 | 102930 | 104513 | - | CBM91 | GH43_10 |
| CAZyme | k141_116681 | k141_116681_85 | 104627 | 107080 | - | GH31_4 |
| CAZyme | k141_116681 | k141_116681_86 | 107141 | 108556 | - | GH43_34 |
| CAZyme | k141_116681 | k141_116681_87 | 108557 | 110422 | - | GH97 |
| pfam | k141_116681 | k141_116681_88 | 110674 | 111057 | - | rhaM |
| TC | k141_116681 | k141_116681_89 | 111073 | 112755 | - | 8.A.46.1.5 |
| TC | k141_116681 | k141_116681_90 | 112769 | 115837 | - | 1.B.14.6.1 |
| CAZyme | k141_116681 | k141_116681_91 | 115933 | 117576 | - | GH29 |
| TF | k141_116681 | k141_116681_92 | 117653 | 118678 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | k141_116681 | k141_116681_93 | 118641 | 118736 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_116681 | k141_116681_94 | 118796 | 119728 | + | 8.A.5.1.6 |
| pfam | k141_116681 | k141_116681_95 | 119746 | 120669 | + | Amidohydro_2 |
| sulfatase | k141_116681 | k141_116681_96 | 120705 | 121724 | + | S1_16 |
| TC | k141_116681 | k141_116681_97 | 121807 | 122451 | - | 2.A.95.1.4 |
Gene ID: k141_116681_84
Type: CAZyme
Location: 102930 - 104513 (-)
Type: CAZyme
Location: 102930 - 104513 (-)
Gene ID: k141_116681_85
Type: CAZyme
Location: 104627 - 107080 (-)
Type: CAZyme
Location: 104627 - 107080 (-)
Gene ID: k141_116681_86
Type: CAZyme
Location: 107141 - 108556 (-)
Type: CAZyme
Location: 107141 - 108556 (-)
Gene ID: k141_116681_87
Type: CAZyme
Location: 108557 - 110422 (-)
Type: CAZyme
Location: 108557 - 110422 (-)
Gene ID: k141_116681_88
Type: pfam
Location: 110674 - 111057 (-)
Type: pfam
Location: 110674 - 111057 (-)
Gene ID: k141_116681_89
Type: TC
Location: 111073 - 112755 (-)
Type: TC
Location: 111073 - 112755 (-)
Gene ID: k141_116681_90
Type: TC
Location: 112769 - 115837 (-)
Type: TC
Location: 112769 - 115837 (-)
Gene ID: k141_116681_91
Type: CAZyme
Location: 115933 - 117576 (-)
Type: CAZyme
Location: 115933 - 117576 (-)
Gene ID: k141_116681_92
Type: TF
Location: 117653 - 118678 (+)
Type: TF
Location: 117653 - 118678 (+)
Gene ID: k141_116681_93
Type:
Location: 118641 - 118736 (-)
Type:
Location: 118641 - 118736 (-)
Gene ID: k141_116681_94
Type: TC
Location: 118796 - 119728 (+)
Type: TC
Location: 118796 - 119728 (+)
Gene ID: k141_116681_95
Type: pfam
Location: 119746 - 120669 (+)
Type: pfam
Location: 119746 - 120669 (+)
Gene ID: k141_116681_96
Type: sulfatase
Location: 120705 - 121724 (+)
Type: sulfatase
Location: 120705 - 121724 (+)
Gene ID: k141_116681_97
Type: TC
Location: 121807 - 122451 (-)
Type: TC
Location: 121807 - 122451 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.