Cluster: CGMR099484_CGC53
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR099484
- CGC Family ID: CGCFAM_01268
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_97349 | k141_97349_17 | 23160 | 24158 | + | GH23 |
| TC | k141_97349 | k141_97349_18 | 24184 | 25068 | - | 1.A.1.24.3 |
| CAZyme | k141_97349 | k141_97349_19 | 25156 | 28251 | + | GH2 |
| CAZyme | k141_97349 | k141_97349_20 | 28544 | 29782 | - | GH109 |
| CAZyme | k141_97349 | k141_97349_21 | 29956 | 30957 | - | GH130_2 |
| pfam | k141_97349 | k141_97349_22 | 30988 | 32286 | - | MFS_1 |
| CAZyme | k141_97349 | k141_97349_23 | 32376 | 34403 | - | GH97 |
| pfam | k141_97349 | k141_97349_24 | 35047 | 35892 | - | Exo_endo_phos |
| TC | k141_97349 | k141_97349_25 | 35937 | 37709 | - | 8.A.46.2.1 |
| TC | k141_97349 | k141_97349_26 | 37733 | 41134 | - | 1.B.14.6.2 |
| CAZyme | k141_97349 | k141_97349_27 | 41425 | 43737 | - | GH92 |
| CAZyme | k141_97349 | k141_97349_28 | 43768 | 46050 | - | GH92 |
| STP | k141_97349 | k141_97349_29 | 46068 | 47060 | - | FecR |
| TF | k141_97349 | k141_97349_30 | 47090 | 47665 | - | GerE |
| CAZyme | k141_97349 | k141_97349_31 | 47705 | 49927 | - | GH92 |
Gene ID: k141_97349_17
Type: CAZyme
Location: 23160 - 24158 (+)
Type: CAZyme
Location: 23160 - 24158 (+)
Gene ID: k141_97349_18
Type: TC
Location: 24184 - 25068 (-)
Type: TC
Location: 24184 - 25068 (-)
Gene ID: k141_97349_19
Type: CAZyme
Location: 25156 - 28251 (+)
Type: CAZyme
Location: 25156 - 28251 (+)
Gene ID: k141_97349_20
Type: CAZyme
Location: 28544 - 29782 (-)
Type: CAZyme
Location: 28544 - 29782 (-)
Gene ID: k141_97349_21
Type: CAZyme
Location: 29956 - 30957 (-)
Type: CAZyme
Location: 29956 - 30957 (-)
Gene ID: k141_97349_22
Type: pfam
Location: 30988 - 32286 (-)
Type: pfam
Location: 30988 - 32286 (-)
Gene ID: k141_97349_23
Type: CAZyme
Location: 32376 - 34403 (-)
Type: CAZyme
Location: 32376 - 34403 (-)
Gene ID: k141_97349_24
Type: pfam
Location: 35047 - 35892 (-)
Type: pfam
Location: 35047 - 35892 (-)
Gene ID: k141_97349_25
Type: TC
Location: 35937 - 37709 (-)
Type: TC
Location: 35937 - 37709 (-)
Gene ID: k141_97349_26
Type: TC
Location: 37733 - 41134 (-)
Type: TC
Location: 37733 - 41134 (-)
Gene ID: k141_97349_27
Type: CAZyme
Location: 41425 - 43737 (-)
Type: CAZyme
Location: 41425 - 43737 (-)
Gene ID: k141_97349_28
Type: CAZyme
Location: 43768 - 46050 (-)
Type: CAZyme
Location: 43768 - 46050 (-)
Gene ID: k141_97349_29
Type: STP
Location: 46068 - 47060 (-)
Type: STP
Location: 46068 - 47060 (-)
Gene ID: k141_97349_30
Type: TF
Location: 47090 - 47665 (-)
Type: TF
Location: 47090 - 47665 (-)
Gene ID: k141_97349_31
Type: CAZyme
Location: 47705 - 49927 (-)
Type: CAZyme
Location: 47705 - 49927 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.