Genome Details
Selected Rep_genome_ID: C19.bin_2
Total Genomes Found: 26
Total Genomes Found: 26
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium duncaniae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C19.bin_2 | 2,962,530 | 100% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR041324 | 2,501,778 | 98.02% | 0% | China | Asia | CGMR |
| CGMR047155 | 2,510,296 | 100% | 0% | China | Asia | CGMR |
| HRGMv2_2664 | 3,115,456 | 100% | 0% | NA | NA | HRGM |
| Rep_3068 | 2,586,710 | 99.2347% | 0% | NA | NA | WIS |
| SPMP05_bin.32 | 2,240,828 | 90.48% | 1.36% | Singapore | Asia | SPMP |
| SPMP06_bin.94 | 2,560,859 | 98.87% | 3.06% | Singapore | Asia | SPMP |
| SPMP08_bin.28 | 2,349,760 | 96.26% | 0% | Singapore | Asia | SPMP |
| SPMP13_bin.67 | 2,419,082 | 95.5% | 4.76% | Singapore | Asia | SPMP |
| SPMP22_bin.17 | 2,417,153 | 98.56% | 0% | Singapore | Asia | SPMP |
| SPMP29_bin.54 | 2,526,888 | 98.84% | 1.36% | Singapore | Asia | SPMP |
| SPMP30_bin.166 | 2,549,909 | 98.3% | 1.13% | Singapore | Asia | SPMP |
| SPMP41_bin.83 | 2,630,276 | 98.64% | 0% | Singapore | Asia | SPMP |
| SPMP49_bin.75 | 2,213,856 | 93.71% | 1.18% | Singapore | Asia | SPMP |
| SPMP51_bin.56 | 2,511,330 | 93.38% | 1.36% | Singapore | Asia | SPMP |
| SPMP53_bin.3 | 2,102,865 | 93.2% | 0% | Singapore | Asia | SPMP |
| SPMP54_bin.28 | 2,492,481 | 93.47% | 0% | Singapore | Asia | SPMP |
| SPMP57_bin.80 | 2,505,221 | 97.32% | 2.72% | Singapore | Asia | SPMP |
| SPMP61_bin.50 | 2,308,722 | 97.81% | 0% | Singapore | Asia | SPMP |
| SPMP78_bin.42 | 2,333,989 | 95.21% | 3.67% | Singapore | Asia | SPMP |
| SPMP80_bin.82 | 2,560,571 | 97.28% | 0.67% | Singapore | Asia | SPMP |
| SPMP82_bin.68 | 1,974,183 | 90.93% | 1.7% | Singapore | Asia | SPMP |
| SPMP88_bin.99 | 2,164,743 | 94.96% | 2.49% | Singapore | Asia | SPMP |
| SPMP91_bin.29 | 2,577,075 | 91.16% | 0% | Singapore | Asia | SPMP |
| SPMP94_bin.17 | 2,537,552 | 98.98% | 0% | Singapore | Asia | SPMP |
| SW034_maxbin.010 | 2,677,461 | 100% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C19.bin_2_CGC2 | CGCFAM_00003 | Yes | 9 | 5 | |
| C19.bin_2_CGC24 | CGCFAM_00005 | Yes | 3 | 2 | |
| C19.bin_2_CGC3 | CGCFAM_00005 | Yes | 7 | 5 | |
| C19.bin_2_CGC19 | CGCFAM_00063 | Yes | 7 | 2 | |
| C19.bin_2_CGC10 | CGCFAM_00075 | Yes | 4 | 1 | |
| C19.bin_2_CGC21 | CGCFAM_00075 | Yes | 5 | 2 | |
| C19.bin_2_CGC32 | CGCFAM_00078 | Yes | 5 | 1 | galactan |
| C19.bin_2_CGC34 | CGCFAM_00193 | Yes | 11 | 5 | |
| C19.bin_2_CGC7 | CGCFAM_00252 | Yes | 5 | 1 | |
| C19.bin_2_CGC25 | CGCFAM_00545 | Yes | 5 | 1 | |
| C19.bin_2_CGC26 | CGCFAM_01090 | Yes | 5 | 1 | |
| C19.bin_2_CGC35 | CGCFAM_01413 | Yes | 4 | 1 | |
| C19.bin_2_CGC29 | CGCFAM_01424 | Yes | 6 | 1 | |
| C19.bin_2_CGC30 | CGCFAM_01557 | Yes | 3 | 1 | |
| C19.bin_2_CGC27 | CGCFAM_03134 | Yes | 9 | 3 | |
| C19.bin_2_CGC12 | CGCFAM_03646 | Yes | 10 | 2 | |
| C19.bin_2_CGC31 | CGCFAM_03647 | Yes | 6 | 1 | |
| C19.bin_2_CGC36 | CGCFAM_04449 | Yes | 5 | 1 | |
| C19.bin_2_CGC13 | CGCFAM_05221 | Yes | 3 | 1 | |
| C19.bin_2_CGC15 | CGCFAM_05222 | Yes | 12 | 2 | |
| C19.bin_2_CGC16 | CGCFAM_07952 | Yes | 3 | 1 | |
| C19.bin_2_CGC4 | CGCFAM_07953 | Yes | 8 | 1 | |
| C19.bin_2_CGC5 | CGCFAM_07954 | Yes | 11 | 2 |
Top CAZyme Families