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Cluster: C19.bin_2_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C19_contig_692 C19_contig_692_216 235427 236425 - 3.A.1.2.3
TC C19_contig_692 C19_contig_692_217 236444 237985 - 3.A.1.2.3
TC C19_contig_692 C19_contig_692_218 238151 239203 - 3.A.1.2.3
TF C19_contig_692 C19_contig_692_219 239586 240788 - HTH_AraC | HTH_AraC
TC C19_contig_692 C19_contig_692_220 240920 242308 - 2.A.2.3.1
CAZyme C19_contig_692 C19_contig_692_221 242724 244550 + GH2
TC C19_contig_692 C19_contig_692_222 244614 245735 - 3.A.11.1.4
pfam C19_contig_692 C19_contig_692_223 245708 247771 - Radical_SAM | Radical_SAM_N | DUF3362
TC C19_contig_692 C19_contig_692_224 247844 250687 - 3.A.12.1.1
peptidase C19_contig_692 C19_contig_692_225 251109 252620 - S09.UNW
CAZyme C19_contig_692 C19_contig_692_226 252691 254130 - GH1
Gene ID: C19_contig_692_216
Type: TC
Location: 235427 - 236425 (-)
Gene ID: C19_contig_692_217
Type: TC
Location: 236444 - 237985 (-)
Gene ID: C19_contig_692_218
Type: TC
Location: 238151 - 239203 (-)
Gene ID: C19_contig_692_219
Type: TF
Location: 239586 - 240788 (-)
Gene ID: C19_contig_692_220
Type: TC
Location: 240920 - 242308 (-)
Gene ID: C19_contig_692_221
Type: CAZyme
Location: 242724 - 244550 (+)
Gene ID: C19_contig_692_222
Type: TC
Location: 244614 - 245735 (-)
Gene ID: C19_contig_692_223
Type: pfam
Location: 245708 - 247771 (-)
Gene ID: C19_contig_692_224
Type: TC
Location: 247844 - 250687 (-)
Gene ID: C19_contig_692_225
Type: peptidase
Location: 251109 - 252620 (-)
Gene ID: C19_contig_692_226
Type: CAZyme
Location: 252691 - 254130 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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