Cluster: C19.bin_2_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C19.bin_2
- CGC Family ID: CGCFAM_04449
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C19_contig_698 | C19_contig_698_1918 | 2106659 | 2108488 | + | 1.A.33.1.4 |
| pfam | C19_contig_698 | C19_contig_698_1919 | 2108605 | 2109774 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| pfam | C19_contig_698 | C19_contig_698_1920 | 2109838 | 2110671 | - | S6PP | Hydrolase_3 |
| CAZyme | C19_contig_698 | C19_contig_698_1921 | 2110675 | 2112399 | - | GH25 |
| TC | C19_contig_698 | C19_contig_698_1922 | 2112538 | 2113596 | + | 9.A.23.1.1 |
Gene ID: C19_contig_698_1918
Type: TC
Location: 2106659 - 2108488 (+)
Type: TC
Location: 2106659 - 2108488 (+)
Gene ID: C19_contig_698_1919
Type: pfam
Location: 2108605 - 2109774 (+)
Type: pfam
Location: 2108605 - 2109774 (+)
Gene ID: C19_contig_698_1920
Type: pfam
Location: 2109838 - 2110671 (-)
Type: pfam
Location: 2109838 - 2110671 (-)
Gene ID: C19_contig_698_1921
Type: CAZyme
Location: 2110675 - 2112399 (-)
Type: CAZyme
Location: 2110675 - 2112399 (-)
Gene ID: C19_contig_698_1922
Type: TC
Location: 2112538 - 2113596 (+)
Type: TC
Location: 2112538 - 2113596 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium duncaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.