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Cluster: C19.bin_2_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C19_contig_698 C19_contig_698_307 331109 332587 - GH77
TC C19_contig_698 C19_contig_698_308 332601 333443 - 3.A.1.1.45
TC C19_contig_698 C19_contig_698_309 333443 334294 - 3.A.1.1.45
TC C19_contig_698 C19_contig_698_310 334391 335731 - 3.A.1.1.45
TF C19_contig_698 C19_contig_698_311 335792 336808 - LacI
pfam C19_contig_698 C19_contig_698_312 337278 337535 - Ribosomal_S18
TC C19_contig_698 C19_contig_698_313 337582 338061 - 3.A.7.19.1
pfam C19_contig_698 C19_contig_698_314 338092 338376 - Ribosomal_S6
TC C19_contig_698 C19_contig_698_315 338702 339898 + 2.A.37.2.2
CAZyme C19_contig_698 C19_contig_698_316 340160 340918 + CBM13
Gene ID: C19_contig_698_307
Type: CAZyme
Location: 331109 - 332587 (-)
Gene ID: C19_contig_698_308
Type: TC
Location: 332601 - 333443 (-)
Gene ID: C19_contig_698_309
Type: TC
Location: 333443 - 334294 (-)
Gene ID: C19_contig_698_310
Type: TC
Location: 334391 - 335731 (-)
Gene ID: C19_contig_698_311
Type: TF
Location: 335792 - 336808 (-)
Gene ID: C19_contig_698_312
Type: pfam
Location: 337278 - 337535 (-)
Gene ID: C19_contig_698_313
Type: TC
Location: 337582 - 338061 (-)
Gene ID: C19_contig_698_314
Type: pfam
Location: 338092 - 338376 (-)
Gene ID: C19_contig_698_315
Type: TC
Location: 338702 - 339898 (+)
Gene ID: C19_contig_698_316
Type: CAZyme
Location: 340160 - 340918 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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