Cluster: C19.bin_2_CGC27
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: C19.bin_2
- CGC Family ID: CGCFAM_03134
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C19_contig_698 | C19_contig_698_1573 | 1699327 | 1700745 | - | GT5 |
| pfam | C19_contig_698 | C19_contig_698_1574 | 1700876 | 1702003 | - | NTP_transferase | Hexapep_GlmU |
| pfam | C19_contig_698 | C19_contig_698_1575 | 1701997 | 1703190 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | C19_contig_698 | C19_contig_698_1576 | 1703272 | 1705533 | - | CBM48 | GH13_9 |
| pfam | C19_contig_698 | C19_contig_698_1577 | 1705810 | 1706886 | - | DUF348 | 3D | G5 |
| NULL(UNKNOWN) | C19_contig_698 | C19_contig_698_1578 | 1707466 | 1708239 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C19_contig_698 | C19_contig_698_1579 | 1708239 | 1708862 | + | GH25 |
| pfam | C19_contig_698 | C19_contig_698_1580 | 1708879 | 1709127 | + | Holin_SPP1 |
| TC | C19_contig_698 | C19_contig_698_1581 | 1709197 | 1710180 | - | 8.A.5.1.4 |
Gene ID: C19_contig_698_1573
Type: CAZyme
Location: 1699327 - 1700745 (-)
Type: CAZyme
Location: 1699327 - 1700745 (-)
Gene ID: C19_contig_698_1574
Type: pfam
Location: 1700876 - 1702003 (-)
Type: pfam
Location: 1700876 - 1702003 (-)
Gene ID: C19_contig_698_1575
Type: pfam
Location: 1701997 - 1703190 (-)
Type: pfam
Location: 1701997 - 1703190 (-)
Gene ID: C19_contig_698_1576
Type: CAZyme
Location: 1703272 - 1705533 (-)
Type: CAZyme
Location: 1703272 - 1705533 (-)
Gene ID: C19_contig_698_1577
Type: pfam
Location: 1705810 - 1706886 (-)
Type: pfam
Location: 1705810 - 1706886 (-)
Gene ID: C19_contig_698_1578
Type:
Location: 1707466 - 1708239 (+)
Type:
Location: 1707466 - 1708239 (+)
Gene ID: C19_contig_698_1579
Type: CAZyme
Location: 1708239 - 1708862 (+)
Type: CAZyme
Location: 1708239 - 1708862 (+)
Gene ID: C19_contig_698_1580
Type: pfam
Location: 1708879 - 1709127 (+)
Type: pfam
Location: 1708879 - 1709127 (+)
Gene ID: C19_contig_698_1581
Type: TC
Location: 1709197 - 1710180 (-)
Type: TC
Location: 1709197 - 1710180 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium duncaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.