Cluster: C19.bin_2_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C19.bin_2
- CGC Family ID: CGCFAM_01424
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C19_contig_698 | C19_contig_698_1626 | 1757531 | 1758658 | - | CE9 |
| sulfatase | C19_contig_698 | C19_contig_698_1627 | 1758823 | 1759551 | - | S1_9 |
| TC | C19_contig_698 | C19_contig_698_1628 | 1759751 | 1761223 | - | 4.A.1.1.7 |
| pfam | C19_contig_698 | C19_contig_698_1629 | 1761539 | 1762456 | + | MTS | PrmA | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| pfam | C19_contig_698 | C19_contig_698_1630 | 1762552 | 1763295 | + | Methyltrans_RNA | PUA_4 |
| TC | C19_contig_698 | C19_contig_698_1631 | 1763345 | 1764955 | - | 8.A.7.1.5 |
Gene ID: C19_contig_698_1626
Type: CAZyme
Location: 1757531 - 1758658 (-)
Type: CAZyme
Location: 1757531 - 1758658 (-)
Gene ID: C19_contig_698_1627
Type: sulfatase
Location: 1758823 - 1759551 (-)
Type: sulfatase
Location: 1758823 - 1759551 (-)
Gene ID: C19_contig_698_1628
Type: TC
Location: 1759751 - 1761223 (-)
Type: TC
Location: 1759751 - 1761223 (-)
Gene ID: C19_contig_698_1629
Type: pfam
Location: 1761539 - 1762456 (+)
Type: pfam
Location: 1761539 - 1762456 (+)
Gene ID: C19_contig_698_1630
Type: pfam
Location: 1762552 - 1763295 (+)
Type: pfam
Location: 1762552 - 1763295 (+)
Gene ID: C19_contig_698_1631
Type: TC
Location: 1763345 - 1764955 (-)
Type: TC
Location: 1763345 - 1764955 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium duncaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.