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Cluster: C19.bin_2_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C19_contig_692 C19_contig_692_51 60475 61923 - 2.A.66.2.10
CAZyme C19_contig_692 C19_contig_692_52 61924 62973 - GT2
CAZyme C19_contig_692 C19_contig_692_53 62992 63948 - GT2
pfam C19_contig_692 C19_contig_692_54 63960 65108 - EpsG
CAZyme C19_contig_692 C19_contig_692_55 65121 66119 - GT2
CAZyme C19_contig_692 C19_contig_692_56 66135 67109 - GT2
CAZyme C19_contig_692 C19_contig_692_57 67119 68228 - GT4
pfam C19_contig_692 C19_contig_692_58 68225 69229 - 3Beta_HSD | Epimerase | NAD_binding_4 | GDP_Man_Dehyd
TC C19_contig_692 C19_contig_692_59 69226 70677 - 9.B.18.1.2
Gene ID: C19_contig_692_51
Type: TC
Location: 60475 - 61923 (-)
Gene ID: C19_contig_692_52
Type: CAZyme
Location: 61924 - 62973 (-)
Gene ID: C19_contig_692_53
Type: CAZyme
Location: 62992 - 63948 (-)
Gene ID: C19_contig_692_54
Type: pfam
Location: 63960 - 65108 (-)
Gene ID: C19_contig_692_55
Type: CAZyme
Location: 65121 - 66119 (-)
Gene ID: C19_contig_692_56
Type: CAZyme
Location: 66135 - 67109 (-)
Gene ID: C19_contig_692_57
Type: CAZyme
Location: 67119 - 68228 (-)
Gene ID: C19_contig_692_58
Type: pfam
Location: 68225 - 69229 (-)
Gene ID: C19_contig_692_59
Type: TC
Location: 69226 - 70677 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C19_contig_692_52 vegan > omnivore 3.55068 0.00290

🧭 Explore Read Mapping of CGC

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