Cluster: C19.bin_2_CGC34
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: C19.bin_2
- CGC Family ID: CGCFAM_00193
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C19_contig_698 | C19_contig_698_1744 | 1893800 | 1894882 | - | CBM35inCE17 | CE17 |
| CAZyme | C19_contig_698 | C19_contig_698_1745 | 1894879 | 1895808 | - | GH113 |
| CAZyme | C19_contig_698 | C19_contig_698_1746 | 1896080 | 1897192 | + | CE2 |
| TF | C19_contig_698 | C19_contig_698_1747 | 1897305 | 1898291 | - | LacI |
| STP | C19_contig_698 | C19_contig_698_1748 | 1898683 | 1900095 | + | SBP_bac_1 |
| TC | C19_contig_698 | C19_contig_698_1749 | 1900167 | 1901114 | + | 3.A.1.1.28 |
| TC | C19_contig_698 | C19_contig_698_1750 | 1901131 | 1901976 | + | 3.A.1.1.34 |
| CAZyme | C19_contig_698 | C19_contig_698_1751 | 1902094 | 1903113 | + | GH130_2 |
| pfam | C19_contig_698 | C19_contig_698_1752 | 1903254 | 1904435 | + | GlcNAc_2-epim |
| CAZyme | C19_contig_698 | C19_contig_698_1753 | 1904422 | 1905612 | + | GH130_1 |
| TC | C19_contig_698 | C19_contig_698_1754 | 1905650 | 1906330 | + | 9.B.28.1.2 |
Gene ID: C19_contig_698_1744
Type: CAZyme
Location: 1893800 - 1894882 (-)
Type: CAZyme
Location: 1893800 - 1894882 (-)
Gene ID: C19_contig_698_1745
Type: CAZyme
Location: 1894879 - 1895808 (-)
Type: CAZyme
Location: 1894879 - 1895808 (-)
Gene ID: C19_contig_698_1746
Type: CAZyme
Location: 1896080 - 1897192 (+)
Type: CAZyme
Location: 1896080 - 1897192 (+)
Gene ID: C19_contig_698_1747
Type: TF
Location: 1897305 - 1898291 (-)
Type: TF
Location: 1897305 - 1898291 (-)
Gene ID: C19_contig_698_1748
Type: STP
Location: 1898683 - 1900095 (+)
Type: STP
Location: 1898683 - 1900095 (+)
Gene ID: C19_contig_698_1749
Type: TC
Location: 1900167 - 1901114 (+)
Type: TC
Location: 1900167 - 1901114 (+)
Gene ID: C19_contig_698_1750
Type: TC
Location: 1901131 - 1901976 (+)
Type: TC
Location: 1901131 - 1901976 (+)
Gene ID: C19_contig_698_1751
Type: CAZyme
Location: 1902094 - 1903113 (+)
Type: CAZyme
Location: 1902094 - 1903113 (+)
Gene ID: C19_contig_698_1752
Type: pfam
Location: 1903254 - 1904435 (+)
Type: pfam
Location: 1903254 - 1904435 (+)
Gene ID: C19_contig_698_1753
Type: CAZyme
Location: 1904422 - 1905612 (+)
Type: CAZyme
Location: 1904422 - 1905612 (+)
Gene ID: C19_contig_698_1754
Type: TC
Location: 1905650 - 1906330 (+)
Type: TC
Location: 1905650 - 1906330 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium duncaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.