Cluster: C19.bin_2_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: C19.bin_2
- CGC Family ID: CGCFAM_00078
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C19_contig_698 | C19_contig_698_1689 | 1829192 | 1830709 | - | 2.A.2.3.2 |
| pfam | C19_contig_698 | C19_contig_698_1690 | 1831073 | 1831624 | - | TM2 |
| pfam | C19_contig_698 | C19_contig_698_1691 | 1831761 | 1833389 | - | MFS_2 |
| CAZyme | C19_contig_698 | C19_contig_698_1692 | 1833819 | 1836062 | + | GH3 |
| TC | C19_contig_698 | C19_contig_698_1693 | 1836107 | 1837483 | + | 2.A.66.1.32 |
Gene ID: C19_contig_698_1689
Type: TC
Location: 1829192 - 1830709 (-)
Type: TC
Location: 1829192 - 1830709 (-)
Gene ID: C19_contig_698_1690
Type: pfam
Location: 1831073 - 1831624 (-)
Type: pfam
Location: 1831073 - 1831624 (-)
Gene ID: C19_contig_698_1691
Type: pfam
Location: 1831761 - 1833389 (-)
Type: pfam
Location: 1831761 - 1833389 (-)
Gene ID: C19_contig_698_1692
Type: CAZyme
Location: 1833819 - 1836062 (+)
Type: CAZyme
Location: 1833819 - 1836062 (+)
Gene ID: C19_contig_698_1693
Type: TC
Location: 1836107 - 1837483 (+)
Type: TC
Location: 1836107 - 1837483 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium duncaniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.