CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| VatanenT_2016_SRR4305041_bin.1_CGC43 | — | 4 | 2 | — |
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
GH95
Plant pectic polysaccharide, xylan, Alpha1, 2-l-fucosidase sugar, Alpha-l-fucoside
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC44 | — | 4 | 1 | — |
GT2
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC45 | — | 4 | 2 | — |
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
GH144
Beta-1, 2-glucan (bacteria)
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC46 | — | 6 | 3 | — |
CE9
Host glycan
GH97
Alpha-glucose residue, Alpha-galactoside, alpha-fucoside, Starch
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC47 | — | 4 | 1 | — |
GT28
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC48 | CGCFAM_03880 | 6 | 1 | — |
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC49 | — | 11 | 2 | — |
GT3
GT35
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC50 | CGCFAM_00212 | 16 | 9 | arabinogalactan pectin |
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
GH142
Pectin (rhamnogalacturonan ii)
GH143
Pectin (rhamnogalacturonan ii)
CBM67
L-rhamnose
GH78
Alpha-l-rhamnosidase in polyphenol (naringin, rutin, hesperidin), ulvan, pectin, arabinogalactan-protein, Rhamnogalacturonan
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
CE19
Pectin
GH33
Sialic acid, Sialic acid (o-glycan, n-glycan, mucin, host glycan), Pectin (rhamnogalacturonan ii), lipopolysaccharides (bacteria)
GH130
Mannooligosaccharides, Beta-mannan
GH92
Mannosyl-oligosaccharide, Host n-glycan
PL1
Pectin, Homogalacturonan(de-esterified pectin)
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC51 | CGCFAM_03999 | 15 | 3 | — |
GH109
Mucin-type o-glycans
GH89
Alpha-linked n-acetylglucosamine mucin
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC53 | CGCFAM_11296 | 15 | 7 | — |
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
GH84
Cleave beta-o-linked glcnac of host glycan, Hyaluronan, Mucin
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
CBM32
Galactose, lactose, lacnac
GH29
Human milk oligosaccharides, mucin, host glycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC54 | CGCFAM_00304 | 6 | 1 | — |
GH171
Peptidoglycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC55 | CGCFAM_00256 | 16 | 3 | — |
GH76
Alpha-glucose, Yeast alpha-mannan (yeast cell wall)
GH92
Mannosyl-oligosaccharide, Host n-glycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC56 | CGCFAM_00059 | 8 | 2 | — |
GH109
Mucin-type o-glycans
GH25
Peptidoglycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC57 | — | 14 | 5 | — |
GT4
GH141
Pectin (rhamnogalacturonan ii), Xylan
GH31
Alpha-galactoside, Alpha-mannoside, Sulfoquinovoside (plant sulfolipid), Human blood group a, mucin, host glycan, Mannosyl-oligosaccharide, Glycogen and starch, Starch, Sucrose, Xyloglucan (plant)
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC58 | — | 4 | 1 | — |
GH51
Arabinan, arabinoxylan, Cellulose, beta-glucan, Xylan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC59 | — | 4 | 1 | — |
GH29
Human milk oligosaccharides, mucin, host glycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC6 | — | 4 | 1 | — |
CBM50
Chitin or peptidoglycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC61 | — | 11 | 6 | — |
GT2
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
GH76
Alpha-glucose, Yeast alpha-mannan (yeast cell wall)
GH92
Mannosyl-oligosaccharide, Host n-glycan
GH125
Alpha-mannan, plant n-glycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC62 | — | 4 | 1 | — |
GH23
Chitin, Peptidoglycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC63 | CGCFAM_02304 | 4 | 1 | — |
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
|
Europe |