CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| ShaoY_2019_ERR3405254_bin.1_CGC11 | CGCFAM_05796 | 10 | 2 | — |
CBM32
Galactose, lactose, lacnac
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
GH84
Cleave beta-o-linked glcnac of host glycan, Hyaluronan, Mucin
GH101
Mucin
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC12 | — | 3 | 1 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC13 | — | 4 | 1 | — |
GT51
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC14 | — | 6 | 1 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC15 | CGCFAM_09895 | 4 | 1 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC16 | — | 4 | 1 | — |
GT2
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC17 | — | 8 | 4 | — |
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
GH38
Mannosyl-oligosaccharide
GH125
Alpha-mannan, plant n-glycan
GH92
Mannosyl-oligosaccharide, Host n-glycan
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC18 | — | 3 | 1 | — |
CBM50
Chitin or peptidoglycan
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC19 | CGCFAM_00401 | 18 | 4 | — |
CBM40
Sialic acid
GH33
Sialic acid, Sialic acid (o-glycan, n-glycan, mucin, host glycan), Pectin (rhamnogalacturonan ii), lipopolysaccharides (bacteria)
CE7
Cephalosporin c(antibiotic), Acetylxylan
GH29
Human milk oligosaccharides, mucin, host glycan
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC20 | CGCFAM_02736 | 8 | 1 | — |
CE9
Host glycan
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC21 | CGCFAM_04217 | 7 | 3 | — |
GT28
CBM71
Lactose and lacnac
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
CBM34
Granular starch
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC22 | CGCFAM_02806 | 11 | 1 | — |
GH32
Levan (fructan), Graminan- and levan-type fructans, Fructan(inulin, levan and sucrose), Fructan, Inulin
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC3 | CGCFAM_05791 | 4 | 1 | — |
CBM71
Lactose and lacnac
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC4 | CGCFAM_03353 | 7 | 1 | — |
CBM50
Chitin or peptidoglycan
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC5 | — | 7 | 2 | — |
GH35
Beta-galactoside, Chitosan, chitin, Galactan and arabinogalactan
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC6 | CGCFAM_01064 | 8 | 2 | — |
GH77
Amylomaltase
GT35
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC7 | CGCFAM_02578 | 9 | 1 | — |
GT51
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC8 | — | 5 | 2 | — |
GT2
GT4
|
Europe |
| ShaoY_2019_ERR3405254_bin.1_CGC9 | — | 9 | 3 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
CBM48
Glycogen
GT5
|
Europe |
| ShaoY_2019_ERR3405274_bin.1_CGC1 | CGCFAM_05891 | 11 | 1 | — |
GH136
Human milk oligosaccharides
|
Europe |