Cluster: ShaoY_2019_ERR3405254_bin.1_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405254_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405254_bin.1_k141_1238 | ShaoY_2019_ERR3405254_bin.1_k141_1238_28 | 30603 | 32090 | - | 2.A.66.2.22 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405254_bin.1_k141_1238 | ShaoY_2019_ERR3405254_bin.1_k141_1238_29 | 32324 | 33361 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ShaoY_2019_ERR3405254_bin.1_k141_1238 | ShaoY_2019_ERR3405254_bin.1_k141_1238_30 | 33354 | 34820 | - | O-ag_pol_Wzy |
| CAZyme | ShaoY_2019_ERR3405254_bin.1_k141_1238 | ShaoY_2019_ERR3405254_bin.1_k141_1238_31 | 34836 | 35822 | - | GT2 |
| CAZyme | ShaoY_2019_ERR3405254_bin.1_k141_1238 | ShaoY_2019_ERR3405254_bin.1_k141_1238_32 | 35824 | 36927 | - | GT4 |
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_1238_28
Type: TC
Location: 30603 - 32090 (-)
Type: TC
Location: 30603 - 32090 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_1238_29
Type:
Location: 32324 - 33361 (-)
Type:
Location: 32324 - 33361 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_1238_30
Type: pfam
Location: 33354 - 34820 (-)
Type: pfam
Location: 33354 - 34820 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_1238_31
Type: CAZyme
Location: 34836 - 35822 (-)
Type: CAZyme
Location: 34836 - 35822 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_1238_32
Type: CAZyme
Location: 35824 - 36927 (-)
Type: CAZyme
Location: 35824 - 36927 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.