Cluster: ShaoY_2019_ERR3405254_bin.1_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405254_bin.1
- CGC Family ID: CGCFAM_02736
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405254_bin.1_k141_2251 | ShaoY_2019_ERR3405254_bin.1_k141_2251_59 | 73287 | 73610 | - | 3.A.14.1.2 |
| TC | ShaoY_2019_ERR3405254_bin.1_k141_2251 | ShaoY_2019_ERR3405254_bin.1_k141_2251_60 | 73611 | 74459 | - | 3.A.14.1.1 |
| TC | ShaoY_2019_ERR3405254_bin.1_k141_2251 | ShaoY_2019_ERR3405254_bin.1_k141_2251_61 | 74575 | 75516 | - | 3.A.14.1.2 |
| pfam | ShaoY_2019_ERR3405254_bin.1_k141_2251 | ShaoY_2019_ERR3405254_bin.1_k141_2251_62 | 75574 | 75951 | - | DUF1033 |
| pfam | ShaoY_2019_ERR3405254_bin.1_k141_2251 | ShaoY_2019_ERR3405254_bin.1_k141_2251_63 | 76088 | 77146 | - | ADH_zinc_N | ADH_N |
| CAZyme | ShaoY_2019_ERR3405254_bin.1_k141_2251 | ShaoY_2019_ERR3405254_bin.1_k141_2251_64 | 77286 | 78437 | - | CE9 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405254_bin.1_k141_2251 | ShaoY_2019_ERR3405254_bin.1_k141_2251_65 | 78803 | 79201 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405254_bin.1_k141_2251 | ShaoY_2019_ERR3405254_bin.1_k141_2251_66 | 79374 | 79700 | + | 2.A.7.1.1 |
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_2251_59
Type: TC
Location: 73287 - 73610 (-)
Type: TC
Location: 73287 - 73610 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_2251_60
Type: TC
Location: 73611 - 74459 (-)
Type: TC
Location: 73611 - 74459 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_2251_61
Type: TC
Location: 74575 - 75516 (-)
Type: TC
Location: 74575 - 75516 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_2251_62
Type: pfam
Location: 75574 - 75951 (-)
Type: pfam
Location: 75574 - 75951 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_2251_63
Type: pfam
Location: 76088 - 77146 (-)
Type: pfam
Location: 76088 - 77146 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_2251_64
Type: CAZyme
Location: 77286 - 78437 (-)
Type: CAZyme
Location: 77286 - 78437 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_2251_65
Type:
Location: 78803 - 79201 (-)
Type:
Location: 78803 - 79201 (-)
Gene ID: ShaoY_2019_ERR3405254_bin.1_k141_2251_66
Type: TC
Location: 79374 - 79700 (+)
Type: TC
Location: 79374 - 79700 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.