y
Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna17150.1-v1.0-hybrid |
Family | GT14 |
Protein Properties | Length: 420 Molecular Weight: 47229.7 Isoelectric Point: 9.8007 |
Chromosome | Chromosome/Scaffold: 4 Start: 6641858 End: 6643910 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 78 | 333 | 0 |
FAYLISGSKGDMEKLWRTLKALYHPLNHYVLHLDLEAPVAERLELASRVQNETIFNQVGNVFMIKKANMVTYRGPTMVANTLHACAILLKRSKDWDWFIN LSASDYPLVTQDDLLDTFSGLNRELNFIEHTSQLGWKEEKRAMPLILDPGLYSSNKQDVFWVTPRRALPTSFKLFTGSAWMVLSRWFVEYCVWGWDNLPR TLLMYYTNFVSSPEGYFHTVICNVPEFAKTAVNHDLHYISWDIPPKQHPHTLNIND |
Full Sequence |
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Protein Sequence Length: 420 Download |
MGSANMEKKW LFPLVISSCV CLFLLATSLN LGLVDSPQKL LSSMLQSRVA TNQTSAAFAE 60 TKVSQAPPPP AVPAIPRFAY LISGSKGDME KLWRTLKALY HPLNHYVLHL DLEAPVAERL 120 ELASRVQNET IFNQVGNVFM IKKANMVTYR GPTMVANTLH ACAILLKRSK DWDWFINLSA 180 SDYPLVTQDD LLDTFSGLNR ELNFIEHTSQ LGWKEEKRAM PLILDPGLYS SNKQDVFWVT 240 PRRALPTSFK LFTGSAWMVL SRWFVEYCVW GWDNLPRTLL MYYTNFVSSP EGYFHTVICN 300 VPEFAKTAVN HDLHYISWDI PPKQHPHTLN INDTSKMIGS GAAFARKFKH NDPALDKIDK 360 EFLHRKKDGF TPGGWCAGKP KCSRVGNPNK IKPGPGAARL RTLVGRLTLT AKFGQNQCK* 420 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 4.0e-86 | 78 | 338 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 1 | 419 | 421 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000001 | 89 | 366 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000001 | 89 | 366 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000001 | 89 | 366 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000001 | 89 | 366 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000000003 | 89 | 366 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |