y
Basic Information | |
---|---|
Species | Oryza sativa |
Cazyme ID | LOC_Os05g06050.1 |
Family | GT14 |
Protein Properties | Length: 407 Molecular Weight: 45141.8 Isoelectric Point: 8.2037 |
Chromosome | Chromosome/Scaffold: 5 Start: 3030924 End: 3033213 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT14 | 48 | 313 | 0 |
LAYLLVGARGDGARLLRLLLAVYHPRNRYVLHLSADASDSERRDLAAWVAAATPAVGAFRNVAVVGAPTAGTPVGSSGLAGTLRAAAVLLRLHPDWDWFI TLNAADYPVVTQDDLIYVLSNVSRQFNFVDHTSDIGQKESEKVQSMIVDAGIYLAGRTNFFRASEKRPTPDAFKFFTGISCCLCFCFGSPWVILNRQFIE YCILGWENLPRILLMYFNNIMLPQEGYFHSVICNSLEFRNFTVNNDLRYKAWDNPPQTEPVFLDMT |
Full Sequence |
---|
Protein Sequence Length: 407 Download |
MVSVFFLLSL LLLLFSSSPP RLRLPGPAAA APSLADDLRC GHGAPPCLAY LLVGARGDGA 60 RLLRLLLAVY HPRNRYVLHL SADASDSERR DLAAWVAAAT PAVGAFRNVA VVGAPTAGTP 120 VGSSGLAGTL RAAAVLLRLH PDWDWFITLN AADYPVVTQD DLIYVLSNVS RQFNFVDHTS 180 DIGQKESEKV QSMIVDAGIY LAGRTNFFRA SEKRPTPDAF KFFTGISCCL CFCFGSPWVI 240 LNRQFIEYCI LGWENLPRIL LMYFNNIMLP QEGYFHSVIC NSLEFRNFTV NNDLRYKAWD 300 NPPQTEPVFL DMTHYDKMVD SGAPFARRFR ENESLLDKID GNVLGRWGHG PVPGAWCSGR 360 KSWFSDPCSQ WSDVNIVRPG PQGIKLRQYI NRALEGGEFG SKSCRR* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-41 | 70 | 301 | 232 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-107 | 70 | 405 | 336 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005623 | cell |
GO:0005975 | carbohydrate metabolic process |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0009058 | biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU44151.1 | 0 | 1 | 406 | 1 | 406 | unknow protein [Oryza sativa Japonica Group] |
DDBJ | BAH92951.1 | 0 | 1 | 405 | 1 | 399 | Os05g0152400 [Oryza sativa Japonica Group] |
GenBank | EEC78537.1 | 0 | 19 | 406 | 49 | 430 | hypothetical protein OsI_18492 [Oryza sativa Indica Group] |
RefSeq | NP_001130356.1 | 0 | 21 | 406 | 45 | 421 | hypothetical protein LOC100191451 [Zea mays] |
RefSeq | XP_002439297.1 | 0 | 21 | 406 | 45 | 421 | hypothetical protein SORBIDRAFT_09g004030 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000007 | 62 | 260 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000007 | 62 | 260 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000007 | 62 | 260 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000007 | 62 | 260 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000001 | 62 | 260 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |