y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10008455m |
Family | GT14 |
Protein Properties | Length: 414 Molecular Weight: 46908.2 Isoelectric Point: 9.2274 |
Chromosome | Chromosome/Scaffold: 1 Start: 17487234 End: 17491004 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 72 | 326 | 0 |
FAYLVSGSKGDLEKLWRTLQALYHPRNRYVLHLDLEAPTEERLELASRVEKDPMFSKVGNVYMSTKANMVTYRGPTMVANTLHACAILLKNSKDWDWFIN LSASDYPLVTQDDLLYTFSGLSRKLNFIEHTSHLGWKEEKRAMPLMVDPGLYMLTKSDIFWVTPRRTLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPR TLLMYYTNFVSSPESYFQTVICNVPEFVPTVVNHDLHYISWDNPPGQHPHILSLN |
Full Sequence |
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Protein Sequence Length: 414 Download |
MEKKWVFPLV ISSLICVFLL ATSFNMGLIS SLHTINAIFS IFPSSNHTAP NYAEMKVKQS 60 EPAPSGPKIP RFAYLVSGSK GDLEKLWRTL QALYHPRNRY VLHLDLEAPT EERLELASRV 120 EKDPMFSKVG NVYMSTKANM VTYRGPTMVA NTLHACAILL KNSKDWDWFI NLSASDYPLV 180 TQDDLLYTFS GLSRKLNFIE HTSHLGWKEE KRAMPLMVDP GLYMLTKSDI FWVTPRRTLP 240 TAFKLFTGSA WMVLSRSFVE YCIWGWDNLP RTLLMYYTNF VSSPESYFQT VICNVPEFVP 300 TVVNHDLHYI SWDNPPGQHP HILSLNDTSE MISSSAAFAR KFRQNALVLD KIDKELLGRK 360 NGSFTPGAWC SGDPHCSKVG DPNKIKPGPG AERLRRLVAR LTMEAKRGLN QCT* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 5.0e-88 | 72 | 332 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 1 | 412 | 415 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20295.1 | 0 | 1 | 412 | 1 | 415 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_566506.1 | 0 | 1 | 412 | 6 | 423 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002285024.1 | 0 | 1 | 412 | 6 | 420 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317501.1 | 0 | 1 | 412 | 6 | 418 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002533550.1 | 0 | 1 | 412 | 6 | 416 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000000007 | 83 | 342 | 96 | 365 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000000007 | 83 | 342 | 96 | 365 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000000007 | 83 | 342 | 96 | 365 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000000007 | 83 | 342 | 96 | 365 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000000003 | 83 | 342 | 96 | 365 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |