y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.013G066200.2 |
Family | GT14 |
Protein Properties | Length: 364 Molecular Weight: 41889.5 Isoelectric Point: 10.294 |
Chromosome | Chromosome/Scaffold: 13 Start: 5087915 End: 5092450 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 41 | 295 | 0 |
FAYLISASRGDAKRLTRVLKALYHPGNYYLIHVDADAPEKEHREIAEFVSSDPVFGLVGNVWIVGKPNLVTYRGPTMLATTLHAMAILLRTCKWDWFINL SASDYPLVTQDDLIDAFSTLPRNLNFIQHSSRLGWKLNKRAKPIMIDPGLSSLNKSEIWWVNKQRSLPTAFKLYTGSAWTILSRSFAEYSIVGWDNLPRT LLLYYTNFVSSPEGYFQTVICNSEDYKNTTVNHDLHYITWDTPPKQHPRSLGVKD |
Full Sequence |
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Protein Sequence Length: 364 Download |
MGIKLFMISF MVTSILFSLL YIPTKLTTPN AKYNPPYPVT FAYLISASRG DAKRLTRVLK 60 ALYHPGNYYL IHVDADAPEK EHREIAEFVS SDPVFGLVGN VWIVGKPNLV TYRGPTMLAT 120 TLHAMAILLR TCKWDWFINL SASDYPLVTQ DDLIDAFSTL PRNLNFIQHS SRLGWKLNKR 180 AKPIMIDPGL SSLNKSEIWW VNKQRSLPTA FKLYTGSAWT ILSRSFAEYS IVGWDNLPRT 240 LLLYYTNFVS SPEGYFQTVI CNSEDYKNTT VNHDLHYITW DTPPKQHPRS LGVKDYRRMI 300 LSSRPFARKF KRNDPVLDKI DRELLKRYKG QFAHGGWPGP GSRRLQNLLT KLLSEKNFKR 360 QCR* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1151 | COG1151 | 0.008 | 31 | 128 | 98 | + 6Fe-6S prismane cluster-containing protein [Energy production and conversion] | ||
pfam02485 | Branch | 3.0e-78 | 41 | 300 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 4.0e-175 | 41 | 363 | 342 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK32748.1 | 0 | 12 | 363 | 26 | 378 | AF361580_1 AT3g03690/T12J13_3 [Arabidopsis thaliana] |
GenBank | AAX33323.1 | 0 | 1 | 363 | 1 | 397 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
RefSeq | NP_187019.1 | 0 | 12 | 363 | 26 | 378 | UNE7 (unfertilized embryo sac 7); acetylglucosaminyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002270685.1 | 0 | 34 | 363 | 39 | 391 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319193.1 | 0 | 1 | 363 | 1 | 363 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000000006 | 26 | 327 | 73 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000000006 | 26 | 327 | 73 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000000006 | 26 | 327 | 73 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000000006 | 26 | 327 | 73 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000002 | 26 | 327 | 73 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |