y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10002511m |
Family | GT14 |
Protein Properties | Length: 478 Molecular Weight: 53255.7 Isoelectric Point: 9.203 |
Chromosome | Chromosome/Scaffold: 4 Start: 7446797 End: 7450385 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 129 | 383 | 0 |
IAYLISGSPGDSRRILRLLYATYHPRNRYLLHLDSLSTQSERDRLAVTVQDVPIFRAARNVDVVGKPDFAYQRGSSPMASTLHGASILLRLSGVWDWFVN LSVDDYPLVTQDELLHILSHLPKELNFVNHTSYIGWKESRRLKPVIVDPGLYLVEKTEMFFASQKRELPKAFKLFSGPSFSILSRNFMEHCVLGTDNFPR TLLMYLSNTPASLSNYFPTILCNSNLFKKTIINNNLLYLASNDTSKERYHRLDSK |
Full Sequence |
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Protein Sequence Length: 478 Download |
MSMSPAAGIA WVLYANDGRQ VLKGSTKHST NPHITKCRSS VSFLLQKSGN RAAVKKKKMQ 60 NGLTVAKEQP RVTLYVILTT AFLSLCFLLS LSSSSSSHSS YIGPDNIQPD PRLFPSSSKI 120 AADTAPPSIA YLISGSPGDS RRILRLLYAT YHPRNRYLLH LDSLSTQSER DRLAVTVQDV 180 PIFRAARNVD VVGKPDFAYQ RGSSPMASTL HGASILLRLS GVWDWFVNLS VDDYPLVTQD 240 ELLHILSHLP KELNFVNHTS YIGWKESRRL KPVIVDPGLY LVEKTEMFFA SQKRELPKAF 300 KLFSGPSFSI LSRNFMEHCV LGTDNFPRTL LMYLSNTPAS LSNYFPTILC NSNLFKKTII 360 NNNLLYLASN DTSKERYHRL DSKEFTEMVE SGAAFARGFR YDDTVLDRID HELLGREPGE 420 VVPGGWCLGD SGSNSSSCSV WGDSGILRPG SGSDRLERRI VELLSNDWFK SHQCISE* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 5.0e-67 | 129 | 370 | 242 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 5.0e-115 | 111 | 474 | 364 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS99698.1 | 0 | 68 | 477 | 6 | 417 | At3g24040 [Arabidopsis thaliana] |
DDBJ | BAD43851.1 | 0 | 206 | 477 | 1 | 272 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_189046.1 | 0 | 68 | 477 | 6 | 417 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002299292.1 | 0 | 74 | 477 | 24 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518166.1 | 0 | 108 | 477 | 65 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0003 | 145 | 330 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0003 | 145 | 330 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0003 | 145 | 330 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0003 | 145 | 330 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0008 | 145 | 330 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FY434147 | 276 | 57 | 332 | 0 |
DK487987 | 279 | 43 | 320 | 0 |
DK469240 | 269 | 48 | 315 | 0 |
EE556406 | 255 | 207 | 461 | 0 |
DK495470 | 266 | 46 | 310 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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