y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00018457m |
Family | GT14 |
Protein Properties | Length: 168 Molecular Weight: 19250.8 Isoelectric Point: 5.5123 |
Chromosome | Chromosome/Scaffold: 050890 Start: 3357 End: 4395 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 1 | 76 | 5.9e-31 |
MMLTHQFIEYCIWGWDNLPRTVLMYYANFLSSPEGYFHTVICNVPEFRNTTVNHDLHFISWDNPPKQHPHYLTVDD |
Full Sequence |
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Protein Sequence Length: 168 Download |
MMLTHQFIEY CIWGWDNLPR TVLMYYANFL SSPEGYFHTV ICNVPEFRNT TVNHDLHFIS 60 WDNPPKQHPH YLTVDDFEGM LNSNAPFARK FGREDPVLDK IDQELLGRQP DGFVPGGWTY 120 LLNTTEKGGP LTVERVQDLR PGPGVDRLKK LVTGLLTQEG FDDKHCL* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-21 | 1 | 81 | 85 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 9.0e-83 | 1 | 166 | 168 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG24171.1 | 0 | 1 | 167 | 1 | 167 | hypothetical protein [Zea mays] |
GenBank | ACN25166.1 | 0 | 1 | 167 | 105 | 272 | unknown [Zea mays] |
GenBank | ACN27730.1 | 0 | 1 | 167 | 195 | 361 | unknown [Zea mays] |
RefSeq | NP_001130420.1 | 0 | 1 | 167 | 273 | 439 | hypothetical protein LOC100191516 [Zea mays] |
RefSeq | XP_002437247.1 | 0 | 1 | 167 | 274 | 440 | hypothetical protein SORBIDRAFT_10g023480 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG831895 | 168 | 1 | 168 | 0 |
FL831504 | 168 | 1 | 168 | 0 |
JG951061 | 168 | 1 | 168 | 0 |
JG961617 | 168 | 1 | 168 | 0 |
JG886087 | 168 | 1 | 168 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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