y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os03g16890.1 |
Family | GT14 |
Protein Properties | Length: 403 Molecular Weight: 45371.2 Isoelectric Point: 9.9054 |
Chromosome | Chromosome/Scaffold: 3 Start: 9382925 End: 9387439 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 57 | 309 | 0 |
LAYLVSGGAGDGPRIRRMLRALYHPWNFYLVGVAGEEERADLEAFVRGEEAPRRYGNVRVAAAGEWGPVSRRGPTELAATLHAAAVMLREFDGWSWFINL SASDYPLMPQDDILHIFSYLPRDLNFIEHTSNIGWREYQRARPIIVDPALQISNKTEVVTTKEKRSLPSAFKIFVGSSWVILSRSFLEFCLLGWDNLPRT LLMYFANFLASSEGYFHTVICNSKYYQNTTVNNDLRFMAWDNPPRTLPVNLTT |
Full Sequence |
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Protein Sequence Length: 403 Download |
MRKQPQPQGN RRLRWLRALL LALPLLSVPV LYAALGAARP AAPPRRGAAP HQLPPRLAYL 60 VSGGAGDGPR IRRMLRALYH PWNFYLVGVA GEEERADLEA FVRGEEAPRR YGNVRVAAAG 120 EWGPVSRRGP TELAATLHAA AVMLREFDGW SWFINLSASD YPLMPQDDIL HIFSYLPRDL 180 NFIEHTSNIG WREYQRARPI IVDPALQISN KTEVVTTKEK RSLPSAFKIF VGSSWVILSR 240 SFLEFCLLGW DNLPRTLLMY FANFLASSEG YFHTVICNSK YYQNTTVNND LRFMAWDNPP 300 RTLPVNLTTE HFDAIASSGA PFAHSFANDN PVLDMIDTKL LRRAPERFTP GGWCLGSSVN 360 DKDPCSFFGR SFVLRPTKSS AKLEKLLLKL LEPDNFRSKQ CI* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 4.0e-61 | 57 | 316 | 267 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-125 | 55 | 376 | 325 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0009058 | biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95263.1 | 0 | 1 | 402 | 1 | 402 | glycosyltransferase family 14 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEE58795.1 | 0 | 143 | 402 | 1 | 260 | hypothetical protein OsJ_10333 [Oryza sativa Japonica Group] |
RefSeq | NP_001049716.1 | 0 | 1 | 359 | 1 | 359 | Os03g0276900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152358.1 | 0 | 57 | 401 | 60 | 405 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Zea mays] |
RefSeq | XP_002465469.1 | 0 | 57 | 401 | 68 | 413 | hypothetical protein SORBIDRAFT_01g039410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000005 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000005 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000005 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000005 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000001 | 71 | 322 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |