y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00032862m |
Family | GT14 |
Protein Properties | Length: 295 Molecular Weight: 32496.2 Isoelectric Point: 5.6464 |
Chromosome | Chromosome/Scaffold: 0123590 Start: 415 End: 2574 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 110 | 288 | 0 |
IAYLLEGTKGDGLRMRRTLRAIYHPRNQYILHLDLEAPPRERIDLAMYVKGDPMFSQVGNVRVIAKGNLVTYKGPTMVACTLHAVAILLKEGLDWDWFIN LSASDYPLMTQDDILHVFSSLPRNLNFIEHFQLSGWKVNIRAKPIVLDPGLYLSKKFDLTMTTERRELPTSFKLYTGNC |
Full Sequence |
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Protein Sequence Length: 295 Download |
MRKNWGLSSG PARPFGDRRW LLPFLASLLV TATLLLAAAC GLFSPPYPGG GDAPALFDVV 60 SLADWDDGDG AHPVEAGIRD RLLGAAAADD ENPDDAAVNS DDSDAEPPRI AYLLEGTKGD 120 GLRMRRTLRA IYHPRNQYIL HLDLEAPPRE RIDLAMYVKG DPMFSQVGNV RVIAKGNLVT 180 YKGPTMVACT LHAVAILLKE GLDWDWFINL SASDYPLMTQ DDILHVFSSL PRNLNFIEHF 240 QLSGWKVNIR AKPIVLDPGL YLSKKFDLTM TTERRELPTS FKLYTGNCYG PIIS* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-49 | 110 | 271 | 162 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-91 | 108 | 289 | 182 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001060977.1 | 0 | 1 | 289 | 1 | 282 | Os08g0143500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147601.1 | 0 | 1 | 289 | 1 | 298 | xylosyltransferase 2 [Zea mays] |
RefSeq | XP_002319376.1 | 0 | 1 | 289 | 1 | 268 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002443840.1 | 0 | 1 | 285 | 1 | 299 | hypothetical protein SORBIDRAFT_07g003140 [Sorghum bicolor] |
RefSeq | XP_002517977.1 | 0 | 1 | 289 | 7 | 274 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000001 | 126 | 224 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000001 | 126 | 224 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000001 | 126 | 224 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000001 | 126 | 224 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000004 | 126 | 224 | 101 | 193 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |