y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10004902m |
Family | GT14 |
Protein Properties | Length: 422 Molecular Weight: 47704.6 Isoelectric Point: 9.7721 |
Chromosome | Chromosome/Scaffold: 7 Start: 5047426 End: 5051049 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 81 | 334 | 0 |
GYLVSGSRGDLESLWRVLRTLYHPRNQYVVHLDLESPAEERLELAKRVREDPVFSDVGNVHMITKANLVTYRGPTMVANTLHACAILLKQSKDWDWFINL SASDYPLVTQDDLIDTFSGLDRNLNFIDHSSKLGWKEDKRAKPLIIDPGLYSTKKSDVFWVTPRRTMPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRT LLMYYTNFLSTPEGYFHTVICNAPEYSSTVVNHDLHFISWDRPPKQHPRTLNIN |
Full Sequence |
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Protein Sequence Length: 422 Download |
MASLNSEKKW IFPLAMASLM FTFLVAASFN MGLLSSVRSI NSLIFSSSLS TTNETRAEFA 60 ESKVNKSTHP PPVQPSPPRF GYLVSGSRGD LESLWRVLRT LYHPRNQYVV HLDLESPAEE 120 RLELAKRVRE DPVFSDVGNV HMITKANLVT YRGPTMVANT LHACAILLKQ SKDWDWFINL 180 SASDYPLVTQ DDLIDTFSGL DRNLNFIDHS SKLGWKEDKR AKPLIIDPGL YSTKKSDVFW 240 VTPRRTMPTA FKLFTGSAWM VLSRSFVEYC IWGWDNLPRT LLMYYTNFLS TPEGYFHTVI 300 CNAPEYSSTV VNHDLHFISW DRPPKQHPRT LNINDTERMI ASGTAFARKF RHNDPALDRI 360 DKELLGRGSG NFTPGGWCAG EPKCSRVGNP SKINPGPGSN RLRVLVNRLV LASKLTQRQC 420 R* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-90 | 80 | 340 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 1 | 421 | 421 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB43880.1 | 0 | 31 | 421 | 1 | 384 | putative protein [Arabidopsis thaliana] |
EMBL | CBI20295.1 | 0 | 7 | 421 | 2 | 416 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_194478.3 | 0 | 1 | 421 | 1 | 421 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002285024.1 | 0 | 1 | 421 | 1 | 421 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002533550.1 | 0 | 1 | 421 | 1 | 417 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000005 | 91 | 372 | 96 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000005 | 91 | 372 | 96 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000005 | 91 | 372 | 96 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000005 | 91 | 372 | 96 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000001 | 91 | 372 | 96 | 389 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |