y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si010215m |
Family | GT14 |
Protein Properties | Length: 418 Molecular Weight: 46895.3 Isoelectric Point: 7.0498 |
Chromosome | Chromosome/Scaffold: 7 Start: 13570190 End: 13576159 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 67 | 321 | 0 |
LAYWISGTGGDARRVLRLLRAVYHPRNRYLLHLDAGAAAEERQALAEAVRTEEPAWREFRNVDVVGDAYAVDRTGSSALAAVLHGAAVLLRRGPHWDWLV TLSAEDYPLVTQDDLLYAFSSVPRDLNFIDHTSDLGWKEHERFEKIIVDPSLYMDRNTEPILSKETRRMPDAFQIFTGSPWLILSRSFTEHCVHGWDNLP RKLLMYFANTAYSMESYFQTLICNSSDFRNTTVNGDLRYFVWDDPPGLDPLVLNE |
Full Sequence |
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Protein Sequence Length: 418 Download |
MRPRRLPPCL AATALSAALL LLVLLRTSSS SSSHAPLLAW PSSRHPTPPL PPAAARAEWG 60 PSRPPSLAYW ISGTGGDARR VLRLLRAVYH PRNRYLLHLD AGAAAEERQA LAEAVRTEEP 120 AWREFRNVDV VGDAYAVDRT GSSALAAVLH GAAVLLRRGP HWDWLVTLSA EDYPLVTQDD 180 LLYAFSSVPR DLNFIDHTSD LGWKEHERFE KIIVDPSLYM DRNTEPILSK ETRRMPDAFQ 240 IFTGSPWLIL SRSFTEHCVH GWDNLPRKLL MYFANTAYSM ESYFQTLICN SSDFRNTTVN 300 GDLRYFVWDD PPGLDPLVLN ESNFQNMVNS SAAFARRFEE DAPVLKKMDD ELLNRSRVQL 360 VPGVWCPNLG KEQREVDMDS CLKWGDINAV RPGPAGERLR RFISEISKTR GCGLAAS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-46 | 67 | 328 | 267 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-103 | 61 | 406 | 346 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR16364.1 | 0 | 60 | 403 | 68 | 406 | unknown [Picea sitchensis] |
DDBJ | BAF14321.2 | 0 | 64 | 412 | 60 | 400 | Os04g0301700 [Oryza sativa Japonica Group] |
EMBL | CAE04680.2 | 0 | 64 | 412 | 60 | 423 | OSJNBb0018A10.9 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH66076.1 | 0 | 64 | 412 | 60 | 400 | H0215E01.4 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001052407.1 | 0 | 64 | 412 | 60 | 400 | Os04g0301700 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000002 | 83 | 288 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000002 | 83 | 288 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000002 | 83 | 288 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000002 | 83 | 288 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000006 | 83 | 288 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |