y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra023502 |
Family | GT14 |
Protein Properties | Length: 433 Molecular Weight: 49083.3 Isoelectric Point: 9.3665 |
Chromosome | Chromosome/Scaffold: 02 Start: 3649088 End: 3650841 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 86 | 342 | 0 |
LAYLISGSSGDGQMLKRTLMALYHPNNQYVVHLDRESSAEERLDLSAFVANQTLFGRFRNVRMIVKANFVTYRGPTMVANTLHAAAILLREGGDWDWFIN LSASDYPLVTQDDLLHTFSYLPRDLNFIDHTSNIGWKESHRAKPIIIDPGLYMSKKADVFWVSQKRSMPTAFKLFTGSAWMMLSRPFVDYFIWGWDNLPR IVLMYYANFLSSPEGYFHTVICNAKEFTNTTVNSDLHFISWDNPPKQHPHHLTLDDF |
Full Sequence |
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Protein Sequence Length: 433 Download |
MKKLKSCYLQ VRRHQQQASD RRWILPLAIG SICSLFLLLL TTLASSSSQA RLIPLSVYGL 60 RSSVFVESKI NPLSVSVTPP PPPPRLAYLI SGSSGDGQML KRTLMALYHP NNQYVVHLDR 120 ESSAEERLDL SAFVANQTLF GRFRNVRMIV KANFVTYRGP TMVANTLHAA AILLREGGDW 180 DWFINLSASD YPLVTQDDLL HTFSYLPRDL NFIDHTSNIG WKESHRAKPI IIDPGLYMSK 240 KADVFWVSQK RSMPTAFKLF TGSAWMMLSR PFVDYFIWGW DNLPRIVLMY YANFLSSPEG 300 YFHTVICNAK EFTNTTVNSD LHFISWDNPP KQHPHHLTLD DFDRMVDSNA PFARKFRRDE 360 PVLDKIDSEL LSRSPGMVTP GGWCIGTREN GSDPCAEIGD TSVVKPGSGA KRVEKLVTYL 420 LSNENFRPRQ CR* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-87 | 86 | 346 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 19 | 432 | 421 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_197009.1 | 0 | 1 | 432 | 1 | 434 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002282083.1 | 0 | 1 | 432 | 1 | 428 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305329.1 | 0 | 1 | 432 | 1 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324028.1 | 0 | 1 | 432 | 1 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517446.1 | 0 | 1 | 432 | 1 | 430 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000000002 | 98 | 306 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000000002 | 98 | 306 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000000002 | 98 | 306 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000000002 | 98 | 306 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000000005 | 98 | 306 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |