y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g021260.1 |
Family | GT14 |
Protein Properties | Length: 427 Molecular Weight: 47997.1 Isoelectric Point: 10.9199 |
Chromosome | Chromosome/Scaffold: 1 Start: 24777665 End: 24780003 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 65 | 328 | 0 |
FAYLISASTGDAPRAARLLAALYHPANTYLLHLDREAPAEEHRRLAELVSGPGRGGVYARAGNVWIVGRPNLVTYRGPTMLTTTLHAVAVLLRLRRRWDW FINLSASDYPLVTQDDLMEAFAGLPRDLNFIQHTSHLGWKIKKRARPVILDTALYEDGRAELIRPVNITTNLRRLPTAFKLYTGSAWTMLSRSFAEYVTM GWDNLPRALLLYHANIVSSPEFYFQTVACNSRRFRNATVNSDLHFIRWDNPPKQHPLYLTSRDY |
Full Sequence |
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Protein Sequence Length: 427 Download |
MGLSSIRREV LVSAVFTALL VASILLLPSL LLTGSTGPAR RWPSFLSPST AAEDKEQQAR 60 YPVRFAYLIS ASTGDAPRAA RLLAALYHPA NTYLLHLDRE APAEEHRRLA ELVSGPGRGG 120 VYARAGNVWI VGRPNLVTYR GPTMLTTTLH AVAVLLRLRR RWDWFINLSA SDYPLVTQDD 180 LMEAFAGLPR DLNFIQHTSH LGWKIKKRAR PVILDTALYE DGRAELIRPV NITTNLRRLP 240 TAFKLYTGSA WTMLSRSFAE YVTMGWDNLP RALLLYHANI VSSPEFYFQT VACNSRRFRN 300 ATVNSDLHFI RWDNPPKQHP LYLTSRDYRR MLLSGAAFAR KFREGDPVLD RIDRDILRRR 360 EPGHFAYGGW CSDDGERGGA GAGALCSNPQ EHGRRGAVKA GAGSRRLKAM LTKMLSPRNF 420 RRQQCR* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-55 | 65 | 332 | 272 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 4.0e-125 | 64 | 426 | 363 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33323.1 | 0 | 12 | 426 | 3 | 397 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
GenBank | ACN36394.1 | 0 | 1 | 426 | 8 | 430 | unknown [Zea mays] |
RefSeq | NP_001064674.1 | 0 | 7 | 426 | 7 | 420 | Os10g0437000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002319193.1 | 0 | 61 | 426 | 37 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002467195.1 | 0 | 1 | 426 | 1 | 426 | hypothetical protein SORBIDRAFT_01g021260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000008 | 56 | 312 | 79 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000008 | 56 | 312 | 79 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000008 | 56 | 312 | 79 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000008 | 56 | 312 | 79 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000002 | 56 | 312 | 79 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |