y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g114140.1 |
Family | GT14 |
Protein Properties | Length: 427 Molecular Weight: 48849.7 Isoelectric Point: 7.5977 |
Chromosome | Chromosome/Scaffold: 4 Start: 39119984 End: 39123062 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 110 | 364 | 0 |
IAYLISGSVGDGESLKRTLKALYHPRNQYAVHLDLEASPKERLDLANFVRNEPLFAELGNVRMIVKANLVTYRGPTMVTNTLHAAALLFKEAGDWDWFIN LSASDYPLLTQDDLLHTLSSIPRHLNFIEHTSDIGWKEDQRAKPVIIDPALYSVNKSDVFWVTEKRSVPTAYKLFTGSAWMMLSRQFVEYMLWGWDNLPR IVLMYYANFLSSPEGYFHTVICNAEEFRNTTVNHDLHFISWDNPPKQHPHFLTAE |
Full Sequence |
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Protein Sequence Length: 427 Download |
MVPKVALQTN YLYLSLGSFF THSSLQPQNL SLSLANRNQQ TTTQEEKWFL PLIFSLLLTT 60 FLILLSIFIS SDSSSLLYLT HSRTSKNTPH FVESKLRISS TSPPNSVPRI AYLISGSVGD 120 GESLKRTLKA LYHPRNQYAV HLDLEASPKE RLDLANFVRN EPLFAELGNV RMIVKANLVT 180 YRGPTMVTNT LHAAALLFKE AGDWDWFINL SASDYPLLTQ DDLLHTLSSI PRHLNFIEHT 240 SDIGWKEDQR AKPVIIDPAL YSVNKSDVFW VTEKRSVPTA YKLFTGSAWM MLSRQFVEYM 300 LWGWDNLPRI VLMYYANFLS SPEGYFHTVI CNAEEFRNTT VNHDLHFISW DNPPKQHPHF 360 LTAEHYWSMV ESNAPFGRKF GRNEPLLDKI DTELLGRNAD GYVPGMWFSH ANPNITKPYS 420 FVKNNH* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-75 | 110 | 370 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 82 | 409 | 330 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28190.1 | 0 | 89 | 407 | 127 | 445 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001130420.1 | 0 | 46 | 407 | 24 | 390 | hypothetical protein LOC100191516 [Zea mays] |
RefSeq | XP_002282083.1 | 0 | 91 | 425 | 63 | 397 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285159.1 | 0 | 89 | 424 | 61 | 397 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313551.1 | 0 | 71 | 424 | 38 | 397 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000005 | 122 | 330 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000005 | 122 | 330 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000005 | 122 | 330 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000005 | 122 | 330 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000001 | 122 | 330 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |