y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 345499 |
Family | GT14 |
Protein Properties | Length: 224 Molecular Weight: 26324.1 Isoelectric Point: 7.5939 |
Chromosome | Chromosome/Scaffold: 4 Start: 18035535 End: 18037265 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 6 | 141 | 0 |
EKDILHIFSYLPRYLNFIEHTSNIGWKENQRARPIIIDPGFYHLKKSGVFWAKERRSLPASFKLFMGSTSVALTRPFLEFCIWGWDNLPRTLLMYYSNFL LSTEGYFQTVVCNNKDYQNTTVNHDLHYTNWDPLQQ |
Full Sequence |
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Protein Sequence Length: 224 Download |
MLMESEKDIL HIFSYLPRYL NFIEHTSNIG WKENQRARPI IIDPGFYHLK KSGVFWAKER 60 RSLPASFKLF MGSTSVALTR PFLEFCIWGW DNLPRTLLMY YSNFLLSTEG YFQTVVCNNK 120 DYQNTTVNHD LHYTNWDPLQ QRTLNVTVEN FRDMVQSGAP FAREFREDDL VLDKIDTELL 180 GQTDSGSELK TPEIVKPTVS WKRLEKLMVR LLDHENFRAK QCK* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-30 | 7 | 155 | 154 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 9.0e-91 | 5 | 223 | 233 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU24011.1 | 0 | 5 | 223 | 161 | 398 | unknown [Glycine max] |
EMBL | CBI30571.1 | 0 | 3 | 223 | 47 | 286 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_565866.1 | 0 | 6 | 223 | 167 | 384 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002269924.1 | 0 | 3 | 223 | 226 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309670.1 | 0 | 6 | 223 | 180 | 417 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EV573411 | 220 | 6 | 224 | 0 |
EX117350 | 220 | 6 | 224 | 0 |
EX117349 | 220 | 6 | 224 | 0 |
FY072131 | 212 | 14 | 224 | 0 |
DK528027 | 213 | 13 | 224 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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