y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10021335m |
Family | GT14 |
Protein Properties | Length: 427 Molecular Weight: 48315.4 Isoelectric Point: 6.8401 |
Chromosome | Chromosome/Scaffold: 2 Start: 10311957 End: 10313696 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 49 | 336 | 0 |
FAYYITGGRGDNDRIFRLLLAVYHPRNRYLLHLGAEATDAERLALLSDLKSVPAVNAFGNVDVLGKVDRLSDNGASKTAATLHAVSILLKLDRTWNWFIE LSALDYPLITQDDLSHVFASVNRSVNFIDHTSDLAWKESQRIKPIVVDPALYLARRTQLFTATEKRPTPDAFKVFTGKLIILVVANSLVCIQFYSNQIVL LVCDITAGSPWIVLSRSFLEYCIFGWDNLPRILLMYFNNVILSEECYFHTVICNAPEFSNTTVNGDLRYMIWDSPPKMEPHFLSDSDF |
Full Sequence |
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Protein Sequence Length: 427 Download |
MGAEKKWLFT LFSVVFLSVF LLLLYSISAF TSKPFPSSIR HGPHYPPAFA YYITGGRGDN 60 DRIFRLLLAV YHPRNRYLLH LGAEATDAER LALLSDLKSV PAVNAFGNVD VLGKVDRLSD 120 NGASKTAATL HAVSILLKLD RTWNWFIELS ALDYPLITQD DLSHVFASVN RSVNFIDHTS 180 DLAWKESQRI KPIVVDPALY LARRTQLFTA TEKRPTPDAF KVFTGKLIIL VVANSLVCIQ 240 FYSNQIVLLV CDITAGSPWI VLSRSFLEYC IFGWDNLPRI LLMYFNNVIL SEECYFHTVI 300 CNAPEFSNTT VNGDLRYMIW DSPPKMEPHF LSDSDFEQMA QSGAAFARQF KKDDPVLDMV 360 DRVILKRGRY RVTPGAWCSS HSSWWTDPCS EWDEVNIVKA GPQAKKLDET ITNFLDDLNS 420 QSNQCK* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-67 | 49 | 340 | 296 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-133 | 47 | 426 | 380 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_565009.1 | 0 | 1 | 426 | 1 | 395 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002284096.1 | 0 | 33 | 426 | 39 | 401 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311492.1 | 0 | 1 | 426 | 1 | 390 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315896.1 | 0 | 1 | 426 | 1 | 400 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531062.1 | 0 | 39 | 426 | 40 | 396 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00004 | 65 | 231 | 101 | 254 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00004 | 65 | 231 | 101 | 254 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00004 | 65 | 231 | 101 | 254 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00004 | 65 | 231 | 101 | 254 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0001 | 65 | 231 | 101 | 254 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |