y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035659m |
Family | GT14 |
Protein Properties | Length: 452 Molecular Weight: 49140 Isoelectric Point: 7.0934 |
Chromosome | Chromosome/Scaffold: 9 Start: 8340694 End: 8343232 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 88 | 349 | 0 |
FAYLISGSAGDAGMMRRCLLALYHPRNRYILHLDAEAPDADRAGLAAFVAAHPVLSAAGNVRVIEKANLVTYRGPTMVTTTLHAAAAFLWGEGRGRGADW DWFINLSASDYPLVTQDDLMHVFSKLPRDLNFIDHTSNITWKAFARAMPVIIDPALYMKTKGDLFWVQEKRSLPTAFKLFTGSAWMVLSRPFVEYLIWGW DNLPRTVLMYYANFISSPEGYFHTVACNAGAFRNTTVNSDLHYISWDNPPMQHPHHLTLADW |
Full Sequence |
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Protein Sequence Length: 452 Download |
MESAACPART ASAVDLRWLL SVAAGGLFAL LLLLATSPFP LPTSSRLFVS PVSRSSSTTS 60 SPRPLPPLFV ESTLSRSTPP AATSPPRFAY LISGSAGDAG MMRRCLLALY HPRNRYILHL 120 DAEAPDADRA GLAAFVAAHP VLSAAGNVRV IEKANLVTYR GPTMVTTTLH AAAAFLWGEG 180 RGRGADWDWF INLSASDYPL VTQDDLMHVF SKLPRDLNFI DHTSNITWKA FARAMPVIID 240 PALYMKTKGD LFWVQEKRSL PTAFKLFTGS AWMVLSRPFV EYLIWGWDNL PRTVLMYYAN 300 FISSPEGYFH TVACNAGAFR NTTVNSDLHY ISWDNPPMQH PHHLTLADWD AMLASGAPFG 360 RKFPRDDPVL DRIDAEVLAR PGAGTVAPGG WCAGGEGEER RGNGSGDPCA AVGNAGLLRP 420 GPGAERLQTL VTSLLSEENF RPRQCVVEEE N* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-70 | 88 | 353 | 270 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-177 | 88 | 446 | 359 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAV49991.1 | 0 | 61 | 445 | 43 | 424 | putative N-acetylglucosaminyltransferase [Hordeum vulgare subsp. vulgare] |
EMBL | CAH05144.1 | 0 | 68 | 445 | 50 | 424 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Aegilops tauschii] |
RefSeq | NP_001050958.1 | 0 | 57 | 451 | 48 | 449 | Os03g0692000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147735.1 | 0 | 33 | 451 | 44 | 455 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Zea mays] |
RefSeq | XP_002466639.1 | 0 | 39 | 451 | 39 | 457 | hypothetical protein SORBIDRAFT_01g011480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000002 | 101 | 309 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000002 | 101 | 309 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000002 | 101 | 309 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000002 | 101 | 309 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000006 | 101 | 309 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |