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Genome Details

Selected Rep_genome_ID: ShaoY_2019_ERR3404906_bin.6
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Clostridiales
→
Family
Clostridiaceae
→
Genus
Clostridium
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
ShaoY_2019_ERR3404906_bin.6 2,980,977 100% 1.612% UK Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ShaoY_2019_ERR3404906_bin.6_CGC8 CGCFAM_00012 Yes 3 2 host glycan/beta-glucan
ShaoY_2019_ERR3404906_bin.6_CGC20 - Yes 16 3 N/A
ShaoY_2019_ERR3404906_bin.6_CGC27 CGCFAM_00174 Yes 4 1 alpha-glucan
ShaoY_2019_ERR3404906_bin.6_CGC36 CGCFAM_00185 Yes 3 1
ShaoY_2019_ERR3404906_bin.6_CGC6 CGCFAM_00305 Yes 3 1
ShaoY_2019_ERR3404906_bin.6_CGC2 CGCFAM_00308 Yes 4 1
ShaoY_2019_ERR3404906_bin.6_CGC35 CGCFAM_00851 Yes 4 2
ShaoY_2019_ERR3404906_bin.6_CGC37 CGCFAM_01781 Yes 8 3
ShaoY_2019_ERR3404906_bin.6_CGC26 CGCFAM_02049 Yes 3 1
ShaoY_2019_ERR3404906_bin.6_CGC33 CGCFAM_02596 Yes 4 2
ShaoY_2019_ERR3404906_bin.6_CGC24 CGCFAM_03695 Yes 4 1
ShaoY_2019_ERR3404906_bin.6_CGC10 CGCFAM_03869 Yes 6 1
ShaoY_2019_ERR3404906_bin.6_CGC23 CGCFAM_04719 Yes 5 1
ShaoY_2019_ERR3404906_bin.6_CGC9 CGCFAM_04994 Yes 3 1
ShaoY_2019_ERR3404906_bin.6_CGC25 CGCFAM_05566 Yes 7 2
ShaoY_2019_ERR3404906_bin.6_CGC11 CGCFAM_05579 Yes 3 2
ShaoY_2019_ERR3404906_bin.6_CGC5 CGCFAM_07867 Yes 10 2
Top CAZyme Families