Cluster: ShaoY_2019_ERR3404906_bin.6_CGC37
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- CGC Family ID: CGCFAM_01781
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_8646 | ShaoY_2019_ERR3404906_bin.6_k141_8646_26 | 26364 | 28286 | + | 4.A.1.2.6 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_8646 | ShaoY_2019_ERR3404906_bin.6_k141_8646_27 | 28374 | 29798 | + | GH1 |
| TF | ShaoY_2019_ERR3404906_bin.6_k141_8646 | ShaoY_2019_ERR3404906_bin.6_k141_8646_28 | 30018 | 31031 | + | LacI |
| peptidase | ShaoY_2019_ERR3404906_bin.6_k141_8646 | ShaoY_2019_ERR3404906_bin.6_k141_8646_29 | 31156 | 32124 | + | S33.UPW |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_8646 | ShaoY_2019_ERR3404906_bin.6_k141_8646_30 | 32221 | 34287 | + | GH36 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_8646 | ShaoY_2019_ERR3404906_bin.6_k141_8646_31 | 34580 | 35953 | + | 2.A.2.1.1 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_8646 | ShaoY_2019_ERR3404906_bin.6_k141_8646_32 | 36105 | 38057 | + | GH42 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_8646 | ShaoY_2019_ERR3404906_bin.6_k141_8646_33 | 38208 | 38954 | + | 3.A.1.124.4 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8646_26
Type: TC
Location: 26364 - 28286 (+)
Type: TC
Location: 26364 - 28286 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8646_27
Type: CAZyme
Location: 28374 - 29798 (+)
Type: CAZyme
Location: 28374 - 29798 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8646_28
Type: TF
Location: 30018 - 31031 (+)
Type: TF
Location: 30018 - 31031 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8646_29
Type: peptidase
Location: 31156 - 32124 (+)
Type: peptidase
Location: 31156 - 32124 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8646_30
Type: CAZyme
Location: 32221 - 34287 (+)
Type: CAZyme
Location: 32221 - 34287 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8646_31
Type: TC
Location: 34580 - 35953 (+)
Type: TC
Location: 34580 - 35953 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8646_32
Type: CAZyme
Location: 36105 - 38057 (+)
Type: CAZyme
Location: 36105 - 38057 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8646_33
Type: TC
Location: 38208 - 38954 (+)
Type: TC
Location: 38208 - 38954 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.