Cluster: ShaoY_2019_ERR3404906_bin.6_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- CGC Family ID: CGCFAM_00851
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_8325 | ShaoY_2019_ERR3404906_bin.6_k141_8325_21 | 31074 | 32150 | + | GT2 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_8325 | ShaoY_2019_ERR3404906_bin.6_k141_8325_22 | 32179 | 34455 | + | GT2 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_8325 | ShaoY_2019_ERR3404906_bin.6_k141_8325_23 | 34464 | 35258 | + | 3.A.1.104.1 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_8325 | ShaoY_2019_ERR3404906_bin.6_k141_8325_24 | 35270 | 36415 | + | 3.A.1.104.2 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8325_21
Type: CAZyme
Location: 31074 - 32150 (+)
Type: CAZyme
Location: 31074 - 32150 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8325_22
Type: CAZyme
Location: 32179 - 34455 (+)
Type: CAZyme
Location: 32179 - 34455 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8325_23
Type: TC
Location: 34464 - 35258 (+)
Type: TC
Location: 34464 - 35258 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8325_24
Type: TC
Location: 35270 - 36415 (+)
Type: TC
Location: 35270 - 36415 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.