Cluster: ShaoY_2019_ERR3404906_bin.6_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- CGC Family ID: CGCFAM_03869
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_3008 | ShaoY_2019_ERR3404906_bin.6_k141_3008_135 | 133842 | 135773 | + | 3.A.1.121.4 |
| pfam | ShaoY_2019_ERR3404906_bin.6_k141_3008 | ShaoY_2019_ERR3404906_bin.6_k141_3008_136 | 135814 | 136254 | - | dUTPase | DCD |
| pfam | ShaoY_2019_ERR3404906_bin.6_k141_3008 | ShaoY_2019_ERR3404906_bin.6_k141_3008_137 | 136360 | 136734 | - | SpaA |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_3008 | ShaoY_2019_ERR3404906_bin.6_k141_3008_138 | 136796 | 139036 | - | 9.B.34.1.3 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_3008 | ShaoY_2019_ERR3404906_bin.6_k141_3008_139 | 139185 | 140456 | - | 2.A.40.1.4 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_3008 | ShaoY_2019_ERR3404906_bin.6_k141_3008_140 | 140757 | 141329 | + | CE4 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3008_135
Type: TC
Location: 133842 - 135773 (+)
Type: TC
Location: 133842 - 135773 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3008_136
Type: pfam
Location: 135814 - 136254 (-)
Type: pfam
Location: 135814 - 136254 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3008_137
Type: pfam
Location: 136360 - 136734 (-)
Type: pfam
Location: 136360 - 136734 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3008_138
Type: TC
Location: 136796 - 139036 (-)
Type: TC
Location: 136796 - 139036 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3008_139
Type: TC
Location: 139185 - 140456 (-)
Type: TC
Location: 139185 - 140456 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3008_140
Type: CAZyme
Location: 140757 - 141329 (+)
Type: CAZyme
Location: 140757 - 141329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.