Cluster: ShaoY_2019_ERR3404906_bin.6_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- CGC Family ID: CGCFAM_03695
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_5966 | ShaoY_2019_ERR3404906_bin.6_k141_5966_51 | 49777 | 50904 | + | GT4 |
| STP | ShaoY_2019_ERR3404906_bin.6_k141_5966 | ShaoY_2019_ERR3404906_bin.6_k141_5966_52 | 50893 | 52032 | - | SBP_bac_1 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5966 | ShaoY_2019_ERR3404906_bin.6_k141_5966_53 | 52033 | 53130 | - | 9.A.28.1.2 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5966 | ShaoY_2019_ERR3404906_bin.6_k141_5966_54 | 53157 | 54512 | - | 2.A.66.1.28 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5966_51
Type: CAZyme
Location: 49777 - 50904 (+)
Type: CAZyme
Location: 49777 - 50904 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5966_52
Type: STP
Location: 50893 - 52032 (-)
Type: STP
Location: 50893 - 52032 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5966_53
Type: TC
Location: 52033 - 53130 (-)
Type: TC
Location: 52033 - 53130 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5966_54
Type: TC
Location: 53157 - 54512 (-)
Type: TC
Location: 53157 - 54512 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.