Cluster: ShaoY_2019_ERR3404906_bin.6_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- CGC Family ID: CGCFAM_04719
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_5966 | ShaoY_2019_ERR3404906_bin.6_k141_5966_43 | 40477 | 41595 | + | GT4 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5966 | ShaoY_2019_ERR3404906_bin.6_k141_5966_44 | 41806 | 42756 | - | 3.A.1.2.12 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5966 | ShaoY_2019_ERR3404906_bin.6_k141_5966_45 | 42758 | 43849 | - | 3.A.1.2.17 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5966 | ShaoY_2019_ERR3404906_bin.6_k141_5966_46 | 43839 | 45368 | - | 3.A.1.2.12 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5966 | ShaoY_2019_ERR3404906_bin.6_k141_5966_47 | 45443 | 46552 | - | 3.A.1.2.12 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5966_43
Type: CAZyme
Location: 40477 - 41595 (+)
Type: CAZyme
Location: 40477 - 41595 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5966_44
Type: TC
Location: 41806 - 42756 (-)
Type: TC
Location: 41806 - 42756 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5966_45
Type: TC
Location: 42758 - 43849 (-)
Type: TC
Location: 42758 - 43849 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5966_46
Type: TC
Location: 43839 - 45368 (-)
Type: TC
Location: 43839 - 45368 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5966_47
Type: TC
Location: 45443 - 46552 (-)
Type: TC
Location: 45443 - 46552 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.