Cluster: ShaoY_2019_ERR3404906_bin.6_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- CGC Family ID: CGCFAM_00308
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_14 | 15474 | 16583 | - | 3.A.1.1.22 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_15 | 16609 | 17571 | - | CE7 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_16 | 17615 | 18481 | - | 3.A.1.1.34 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_17 | 18499 | 19407 | - | 3.A.1.1.20 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_14
Type: TC
Location: 15474 - 16583 (-)
Type: TC
Location: 15474 - 16583 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_15
Type: CAZyme
Location: 16609 - 17571 (-)
Type: CAZyme
Location: 16609 - 17571 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_16
Type: TC
Location: 17615 - 18481 (-)
Type: TC
Location: 17615 - 18481 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_17
Type: TC
Location: 18499 - 19407 (-)
Type: TC
Location: 18499 - 19407 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.