Cluster: ShaoY_2019_ERR3404906_bin.6_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- CGC Family ID: CGCFAM_00174
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_6114 | ShaoY_2019_ERR3404906_bin.6_k141_6114_31 | 27741 | 29201 | - | GH32 |
| TF | ShaoY_2019_ERR3404906_bin.6_k141_6114 | ShaoY_2019_ERR3404906_bin.6_k141_6114_32 | 29260 | 30240 | - | LacI |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_6114 | ShaoY_2019_ERR3404906_bin.6_k141_6114_33 | 30316 | 31668 | - | 4.A.1.2.1 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_6114 | ShaoY_2019_ERR3404906_bin.6_k141_6114_34 | 31962 | 32741 | - | 2.A.102.4.4 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_6114_31
Type: CAZyme
Location: 27741 - 29201 (-)
Type: CAZyme
Location: 27741 - 29201 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_6114_32
Type: TF
Location: 29260 - 30240 (-)
Type: TF
Location: 29260 - 30240 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_6114_33
Type: TC
Location: 30316 - 31668 (-)
Type: TC
Location: 30316 - 31668 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_6114_34
Type: TC
Location: 31962 - 32741 (-)
Type: TC
Location: 31962 - 32741 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.