Cluster: ShaoY_2019_ERR3404906_bin.6_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- CGC Family ID: CGCFAM_00185
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_8325 | ShaoY_2019_ERR3404906_bin.6_k141_8325_36 | 48508 | 49758 | + | GT2 |
| pfam | ShaoY_2019_ERR3404906_bin.6_k141_8325 | ShaoY_2019_ERR3404906_bin.6_k141_8325_37 | 49774 | 51981 | + | BcsB |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_8325 | ShaoY_2019_ERR3404906_bin.6_k141_8325_38 | 52028 | 53617 | - | 3.A.1.121.4 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8325_36
Type: CAZyme
Location: 48508 - 49758 (+)
Type: CAZyme
Location: 48508 - 49758 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8325_37
Type: pfam
Location: 49774 - 51981 (+)
Type: pfam
Location: 49774 - 51981 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_8325_38
Type: TC
Location: 52028 - 53617 (-)
Type: TC
Location: 52028 - 53617 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.