Genome Details
Selected Rep_genome_ID: Rep_2157
Total Genomes Found: 10
Total Genomes Found: 10
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C108.CMAG_2 | 3,105,258 | 99.33% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR089298 | 2,747,848 | 99.33% | 0% | China | Asia | CGMR |
| HRGMv2_2114 | 3,198,912 | 99.32% | 0% | NA | NA | HRGM |
| KY082_bin.7 | 2,785,278 | 99.33% | 0% | NA | Africa | H3AfricaPhase2 |
| Rep_2157 | 3,333,257 | 99.3289% | 0% | NA | NA | WIS |
| SPMP05_bin.119 | 3,054,811 | 99.33% | 0% | Singapore | Asia | SPMP |
| SPMP105_bin.68 | 2,943,459 | 97.56% | 0.67% | Singapore | Asia | SPMP |
| SPMP43_bin.124 | 2,896,591 | 97.14% | 0% | Singapore | Asia | SPMP |
| SPMP60_bin.6 | 2,846,728 | 97.43% | 0% | Singapore | Asia | SPMP |
| SPMP94_bin.3 | 3,273,196 | 99.33% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_2157_CGC31 | CGCFAM_00280 | Yes | 5 | 1 | |
| Rep_2157_CGC34 | CGCFAM_00334 | Yes | 5 | 2 | |
| Rep_2157_CGC18 | CGCFAM_00737 | Yes | 4 | 1 | |
| Rep_2157_CGC15 | CGCFAM_00911 | Yes | 10 | 2 | |
| Rep_2157_CGC14 | CGCFAM_01538 | Yes | 5 | 1 | |
| Rep_2157_CGC23 | CGCFAM_03427 | Yes | 3 | 1 | |
| Rep_2157_CGC37 | CGCFAM_03956 | Yes | 9 | 2 | |
| Rep_2157_CGC13 | CGCFAM_05803 | Yes | 13 | 2 | |
| Rep_2157_CGC12 | CGCFAM_05893 | Yes | 6 | 2 | |
| Rep_2157_CGC25 | CGCFAM_05894 | Yes | 7 | 1 | |
| Rep_2157_CGC4 | CGCFAM_09963 | Yes | 6 | 1 | |
| Rep_2157_CGC16 | CGCFAM_09965 | Yes | 11 | 2 |
Top CAZyme Families