Cluster: Rep_2157_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- CGC Family ID: CGCFAM_00280
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2157_c_0 | Rep_2157_c_0_2463 | 2728722 | 2731310 | - | 9.B.144.1.5 |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_2464 | 2731329 | 2731661 | - | EamA |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_2465 | 2731655 | 2732002 | - | EamA |
| TC | Rep_2157_c_0 | Rep_2157_c_0_2466 | 2732037 | 2733128 | - | 9.B.97.1.2 |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_2467 | 2733162 | 2734097 | - | GT2 |
Gene ID: Rep_2157_c_0_2463
Type: TC
Location: 2728722 - 2731310 (-)
Type: TC
Location: 2728722 - 2731310 (-)
Gene ID: Rep_2157_c_0_2464
Type: pfam
Location: 2731329 - 2731661 (-)
Type: pfam
Location: 2731329 - 2731661 (-)
Gene ID: Rep_2157_c_0_2465
Type: pfam
Location: 2731655 - 2732002 (-)
Type: pfam
Location: 2731655 - 2732002 (-)
Gene ID: Rep_2157_c_0_2466
Type: TC
Location: 2732037 - 2733128 (-)
Type: TC
Location: 2732037 - 2733128 (-)
Gene ID: Rep_2157_c_0_2467
Type: CAZyme
Location: 2733162 - 2734097 (-)
Type: CAZyme
Location: 2733162 - 2734097 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.