Cluster: Rep_2157_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- CGC Family ID: CGCFAM_09963
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_183 | 233547 | 236030 | - | GH94 |
| NULL(UNKNOWN) | Rep_2157_c_0 | Rep_2157_c_0_184 | 236301 | 236933 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2157_c_0 | Rep_2157_c_0_185 | 237027 | 238553 | - | 3.A.1.6.3 |
| TC | Rep_2157_c_0 | Rep_2157_c_0_186 | 238555 | 239379 | - | 3.A.1.6.1 |
| TC | Rep_2157_c_0 | Rep_2157_c_0_187 | 239394 | 240248 | - | 3.A.1.6.1 |
| TC | Rep_2157_c_0 | Rep_2157_c_0_188 | 240310 | 241401 | - | 3.A.1.6.1 |
Gene ID: Rep_2157_c_0_183
Type: CAZyme
Location: 233547 - 236030 (-)
Type: CAZyme
Location: 233547 - 236030 (-)
Gene ID: Rep_2157_c_0_184
Type:
Location: 236301 - 236933 (+)
Type:
Location: 236301 - 236933 (+)
Gene ID: Rep_2157_c_0_185
Type: TC
Location: 237027 - 238553 (-)
Type: TC
Location: 237027 - 238553 (-)
Gene ID: Rep_2157_c_0_186
Type: TC
Location: 238555 - 239379 (-)
Type: TC
Location: 238555 - 239379 (-)
Gene ID: Rep_2157_c_0_187
Type: TC
Location: 239394 - 240248 (-)
Type: TC
Location: 239394 - 240248 (-)
Gene ID: Rep_2157_c_0_188
Type: TC
Location: 240310 - 241401 (-)
Type: TC
Location: 240310 - 241401 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.