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Cluster: Rep_2157_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2157_c_0 Rep_2157_c_0_741 832445 833944 + 3.A.1.2.20
TC Rep_2157_c_0 Rep_2157_c_0_742 833946 834965 + 3.A.1.2.15
CAZyme Rep_2157_c_0 Rep_2157_c_0_743 834987 836465 + GH32
STP Rep_2157_c_0 Rep_2157_c_0_744 836487 837452 + PfkB
TC Rep_2157_c_0 Rep_2157_c_0_745 837653 838831 + 2.A.1.2.15
Gene ID: Rep_2157_c_0_741
Type: TC
Location: 832445 - 833944 (+)
Gene ID: Rep_2157_c_0_742
Type: TC
Location: 833946 - 834965 (+)
Gene ID: Rep_2157_c_0_743
Type: CAZyme
Location: 834987 - 836465 (+)
Gene ID: Rep_2157_c_0_744
Type: STP
Location: 836487 - 837452 (+)
Gene ID: Rep_2157_c_0_745
Type: TC
Location: 837653 - 838831 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2157_c_0_742 vegetarian > omnivore 1.41685 0.03198
Rep_2157_c_0_744 vegan > omnivore 1.44712 0.01867
Rep_2157_c_0_744 vegetarian > omnivore 1.07467 0.03198

🧭 Explore Read Mapping of CGC

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